Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1213 ATGTCGTCGACGACGCAGAATCGTCGTTCGTCCTTTACTTCCTCGACAGCGTCGTCTTTGGCAAAAGCGAAACGACTTCCATCTTCGGTGTCGTTGTGGTCGTCGTCGGGGAAGGCGAAGAGGGTTACTACTCAGAACGTGGCTGTGAAGAGAGCGCCTCTCGCCAACCTCACCAATCAGAGGAACGCGTCTTCTTCTTCTTCTTCTTCTTTGGTGCAAGGTGGTTCAATTAAAGTTTCCAAGACCAAGAAAGAGGCTCCTGCAAGAACCAGCATCACAAAATCAACAATTTCTTGGAACAAATTACCCGAGTTAAAATCTGTTAACTCAAGCTCAGTTGTTATTCCAAGGGCTAATTCTTTACCACGAAGGAAGGATGCTGCTCCCACAGTTGCCACATTCGCCGTGCCTGTCCATAGCAGTATCGATGTTTCTCCTAGTAAAATAGATGGAAGGGATGTTTCAGATGTTCATTCAATTCAGAGAGAGATAACAAGCAATTTAAACATTTCTGATACCAAAGAGCCAGAAGGAGACGTATGTAGTAGGGAAATAATTGTTGAGTTGGAAGAAAGAGTGGACAAGATTGTCAATATTGACAATATTTACTCCGATACGCAGCTTTGTGCAACCTATGTTTGTGACATCTACAAGCACCTACGTGAATCTGAGGAAAAGAAAAGGGCTTCCCCTGACTTCATGGACAGAATTCAGAAGGACATAAATGTTGGCATGCGTGCTATATTGGTTGACTGGCTTGTTGAGGTGGCTGAGGAGTATCGTCTTGTACCTGAAACATTGTATTTGACAGTGAACTACTTAGATCGGTATCTTTCAGGGAATGCTATGAATAGGCAAAGGTTACAACTACTTGGTGTTTCATGCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCTCCTCAGGTGGAAGAATTTTGTTATATAACCGACAATACTTACTTAAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTGAATTATCTTAAGTTCGAAATGACAGCTCCAACAGTTAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTGCTCATGATGTCCAGGAGATCCCTTCACTTCAACTGGAGTACCTAACCAACTTTATTGCCGAATTATCTCTCTTGGAGTACAGTATGTTGAGTTATCCTCCATCACTGGTAGCTGCTTCTGTAATTTTCCTTGCCAGATTTATACTTTTCCCTTCAAAGAAACCATGGAATTCTACATTGCAGCATTACACGCTCTACCGGCCTTCTGACTTGTGTGCATGTGTAAAAGATCTCCATCGTCTTTGTTGCAGCAGCCATGATTCTAATTTACCTGCAATCAGAGATAAATACAGTCAGCATAAGTACAAATGTGTAGCCAAGAAGCACATCCCTCCTTCAATACCTCGAGAAGTTTTCCAGATCAACTGA 1440 0.4222 MSSTTQNRRSSFTSSTASSLAKAKRLPSSVSLWSSSGKAKRVTTQNVAVKRAPLANLTNQRNASSSSSSSLVQGGSIKVSKTKKEAPARTSITKSTISWNKLPELKSVNSSSVVIPRANSLPRRKDAAPTVATFAVPVHSSIDVSPSKIDGRDVSDVHSIQREITSNLNISDTKEPEGDVCSREIIVELEERVDKIVNIDNIYSDTQLCATYVCDIYKHLRESEEKKRASPDFMDRIQKDINVGMRAILVDWLVEVAEEYRLVPETLYLTVNYLDRYLSGNAMNRQRLQLLGVSCMMIASKYEEICAPQVEEFCYITDNTYLKEEVLQMESAVLNYLKFEMTAPTVKCFLRRFVRAAAHDVQEIPSLQLEYLTNFIAELSLLEYSMLSYPPSLVAASVIFLARFILFPSKKPWNSTLQHYTLYRPSDLCACVKDLHRLCCSSHDSNLPAIRDKYSQHKYKCVAKKHIPPSIPREVFQIN* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1213 479 PANTHER CYCLINS 84 478 IPR039361 -
Gso14g1213 479 SUPERFAMILY Cyclin-like 204 341 IPR036915 -
Gso14g1213 479 Pfam Cyclin, N-terminal domain 215 341 IPR006671 -
Gso14g1213 479 ProSitePatterns Cyclins signature. 246 277 IPR006671 -
Gso14g1213 479 PANTHER CYCLIN-A1-1 84 478 - -
Gso14g1213 479 MobiDBLite consensus disorder prediction 1 92 - -
Gso14g1213 479 MobiDBLite consensus disorder prediction 1 77 - -
Gso14g1213 479 Gene3D - 229 342 - -
Gso14g1213 479 SMART Cyclin_C_2 344 468 IPR004367 -
Gso14g1213 479 SMART cyclin_7 251 335 IPR013763 -
Gso14g1213 479 SMART cyclin_7 348 437 IPR013763 -
Gso14g1213 479 PIRSF Cyclin_A_B_D_E 6 475 IPR039361 -
Gso14g1213 479 CDD CYCLIN 342 436 IPR013763 -
Gso14g1213 479 Gene3D - 215 464 - -
Gso14g1213 479 CDD CYCLIN 245 334 IPR013763 -
Gso14g1213 479 SUPERFAMILY Cyclin-like 344 470 IPR036915 -
Gso14g1213 479 Pfam Cyclin, C-terminal domain 344 464 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1213 Gso-Chr14 28677378 28682161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1213 1 476 Core Cell Cycle Gene Families AT1G44110 57.292 5.21e-170 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1213 K06627 - gmx:100798216 896.73