Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1206 ATGGCCACTACAACACAACTTCACTTACCCCCTGGATTCAGATTCCATCCAACAGATGAAGAACTCGTCATCCACTACCTTTGTCGCAAATGCGCTTCGCAACATATCGCGGTTCCCATAATCGCCGAAATTGATCTGTACAAGTACGACCCTTGGGACCTTCCAGGAATGGCTTTGTACGGAGAGAAAGAGTGGTATTTTTTCACGCCGAGGGACCGCAAGTACCCGAACGGTTCGCGGCCGAACCGGTCCGCGGGAACCGGGTACTGGAAGGCAACCGGAGCGGATAAACCAGTTGGTAAACCGAAACCGGTTGGGATCAAGAAAGCGTTGGTTTTTTACGCTGGAAAAGCGCCCAAGGGAGAGAAAACTAACTGGATCATGCACGAGTATCGTCTTGCAGACGTGGATCGTTCCGTTCGCAAAAAGAACAGCTTAAGGCTGGATGACTGGGTGCTGTGCCGAATTTACAACAAGAAAGGTGCAATTGAAAAGCAACAACTACCACCACCGAGTGGGGTCCGCAAAATTGAATGTTCCGAAATGGAGGACGAGAAGCCGGAGATTCTGCCGCCAGATCCGCCGTATACGGCGGCGACGGTGGCGGATTGCCTGTACTTCGAGGCTTCCGACTCGGTGCCCCGGCTGCACACGACGGACTCGAGCTGCTCCGAGCAGGTGGTGTCGGCGGAGTTTGCGAGCGAGGTGCAGAGCGAGCCGAAGAGGGGCAGCAACAACAACAACGAGTTTGCATATAATTACGTGGATGCCACTCTCGGGAATAATCAGATGTCGCCGCTGCAGGATATTTTCATGTACCTCTCCAAGTCCTTCTGCAATTAA 843 0.5291 MATTTQLHLPPGFRFHPTDEELVIHYLCRKCASQHIAVPIIAEIDLYKYDPWDLPGMALYGEKEWYFFTPRDRKYPNGSRPNRSAGTGYWKATGADKPVGKPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGAIEKQQLPPPSGVRKIECSEMEDEKPEILPPDPPYTAATVADCLYFEASDSVPRLHTTDSSCSEQVVSAEFASEVQSEPKRGSNNNNEFAYNYVDATLGNNQMSPLQDIFMYLSKSFCN* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1206 280 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Gso14g1206 280 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Gso14g1206 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 263 - -
Gso14g1206 280 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Gso14g1206 280 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Gso14g1206 280 PANTHER NAC TRANSCRIPTION FACTOR 56 5 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1206 Gso-Chr14 28327665 28329746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1206 7 278 NAC Transcription Factor Family AT1G01720 72.260 2.21e-149 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso14g1206 NAM 3.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1206 - - gmx:100170714 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1206 14 28327665 28329746 Gso13g0153 13 10093968 10095776 GST
Gso4g2116 4 51634281 51638794 Gso14g1206 14 28327665 28329746 PCT
Gso6g0925 6 8881790 8886061 Gso14g1206 14 28327665 28329746 PCT