Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1205 ATGTCAAAGTCTCCCTCTCATGAACAACGGCAGTCCAATTATTCTGCCTCCCAGATTGGGGAGTTTAACGAGGCAACAGGAATGGATGATCCAGAATCTACAATGGCAACGGTTGCTAATTTTGTGGAGCAACTGCATGCCAACTTGTCATCACCTGTTGAGAAAGAAATTATTACAGCACACTTGCTAGGTATGGCCAGGAGAAGAAAGGATGCTAGAGCACTCATCGGTTCTCATGCCCAAGCCATGCCATTGTTCATAAGCATTCTCAGAAATGGAACCCCTCTTGCAAAAGTTAACGTTGCTTCCACTCTCAGTGTCCTGTGCAAAGATGAAGACCTGAGGTTAAAAGTACTTCTTGGTGGCTGTATCCCACCATTATTGTCACTTTTAAATTATGAATCCACCGATGCCAGGAAGGCAGCAGCTGAAGCGATATATGAAGTTTCCTCGGGTGGTCTTTCTGATGATCATGTTGGTATGAAAATTTTTGTTACAGAAGGTGTAGTTCCAACCTTATGGAATCAACTAAATCCAAAGAACAAGGAAGACAAAATTGTGGAGGGTTTTATTACTGGAGCATTAAGAAATCTTTGTGGGGACAAGGACGGCTACTGGAAAGCTACATTAGAAGCTGGAGGCGTGGATATCATAGTAGGGCTCTTGTCTTCAGATAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTATTGGCACGTTTAATGCTGGCATTCAGTGATAGCATCCCCAAAGTAATAGACTCTGGAGCAGTCAAAGCTTTACTTCAGCTTGTTGGTCAGGAAAATGACATTTCTGTAAGAGCTAGTGCTGCTGATGCCCTAGAGGCCCTCTCTTCACAGTCTACCAAGGCTAAAAAGGTCATTGTTAATGCAGATGGTATTCCAATCCTTATTGCAGCTATAGTTGCTCCTTCTAATGAGTGTATGCAAGGTGATGGCGGCCAGGCTCTGCAGGAGCATGCAACTCGAGCTTTAGCCAATATCTGTGGTGGCATGTCTGCTTTAATACTATATCTTGGAGAACTTTCACGTTCTCCTCGCCCTGATTCACCAGTTGGTGATATAATTGGCGCTCTTGCTTATACACTCATGGTCTTTGAGGAAAAAGTTGATGTTGATGAGAAACATTTTGGTGCAACTCAGATAGAGGATATTCTAGTAACTCTTTTAAAGCCTTGGGACAACAATTTAATTCAAGAGCGTGTCCTCGAGGCTATGGCTAGCCTATATGGAAATGTCTGTCTCTCAAAGTGGCTCATTCAGGCAGATTCAAAGAAGGTTCTGATTGGACTTATAACCATGGCTGCCACTGATGTGCAAGAGTATCTGATACTTTCATTGACAAGCTTGTGTTGTGATAAGATTGGATTATGGGAGGCCATTAAAAAAAGGGAAGGCATCCAATTACTAATATCATTGCTTGGATTATCCAGTGAGCAGCATCAAGAGTACTCAGTTCAGTTGCTAGCAATCTTAACTGACCAGGTCGATGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGTTGTTGGAGACAGGATCACAGAAAGCAAGAGAGGAAGCAGCAAATGTTCTGTGGAGTTTGTGCTGTCACAGTGAAGATATTCGTGCTTGTGTTGAAAGTGCTGGAGCCATCCCAGCATTTTTGTGGCTTCTTAAGAGTGGTGGACCAAGAGGACAGGAAGCTTCTGCAATGGCACTCACAAAGCTTGTCCGAGTAGCTGATTCTGCCACAATTAATCAGCTATTAGCATTGCTCCTAGGGCATTCTCCAAGCTCAAAAACCCACATAATCCGAGTTTTAGGTCATGTTCTTACTATGGCTTCGCAGAATGATCTCCTTGAAAAGGGTTCTGCAGCTAATAAAGGCTTGAGATCTCTAGTTCAAGTCCTCAATTCATCAAATGAGGAAACCCAAGAATATGCAGCTTCAGTTCTAGCTGATTTATTTATTACAAGACAAGACATCTGTGATAGTCTTGCAACTGATGAGATTGTACTTCCTTGCGTGAAGCTTTTGACTAGCAAAACTCAAGTTGTTGCCACTCAATCAGCTCGAGCCTTAAGTGCTCTGTCTCGTCCAACAAAGAACAAGGCTGCTAATAAAATGTCTTATATTGTAGAGGGTGACGTCAAGCCACTAATCAAGTTAGCTAAAACATCCTCTGTTGATGCGGCTGAAACTGCTGTTGCTGCATTGGCCAATCTTCTCTTTGATCCTTTTATTGCTGCTGAGGCTCTAGCAGAAGATGTTGTTTCAGCTTTAACAAGAGTTCTGGCAGAAGGGACCTTGGAAGGTAAACGAAATGCATCTCGTGCACTTCATCAATTATTGAAGCATTTTCCAGTAGGTGATGTTCTCAAGGGTAATGCTCAATGCTGTTTCACTGTGCTTGCACTTGTTGATTCCTTAAGAGCTATGGATATGGACGGAACTGATGCAGCAGATGCTTTAGAAGTAATTGCACTGCTAGCCAGAACTAAACAGGGTGTCAACTTCACTTACCCTCCATGGTCAGCTCTGGCTGAAATACCATCAAGCTTAGAACTTCTTGTCTGCTTCCTGGCTGAGGGGCATTCCCTTGTCCAAGACAAGGCAATTAAAATTCTATCTAGACTTTGTGGGGATCAGCCAGTTGTTCTCGGTGAATTGTTATCTGCTAGTTCCAAATCCATTGGTTCATTGGCTAATAGAATAATGAACTCCTCCAGTCTAGAAGTAAAAATTGGAGGTTCTTCCTTATTAATTTGTGCTGCAAAGGAGAAGAAAGAGTTTTCAATGGATTCACTTGATGCTTCTGGGTATCTAAAACCATTAATATATTCTTTAGTTGAAATGATAAAGCAGAATTGTAGCTATTCTTCATTAGAAATTGAAGTTGTCACTTCTAAAGGTTTTATGGAGAGAAATTCTTTTCAAGAAGTTGATGAATTTGATATTCCTGATCCAGCCACTTCCTTGGGAAGCACTATTGCCATGTGGTTGCTTTCAGTTATTGCTTCTTTCCATATAAAGAGCAAGCTCACAATTATGGAAGCTGGTGGACTTGAAGCTCTCTTTGACAAACTTGCAAGACATACTTCAAATCCACAGGCAGAATACGAGGATACAGAAGGAATATGGATCAATGCCTTGCTCTTGGCCATTTTATTTCAAGATGAAAATGTCATTCTATCTCCTGTCACAATGCGCATAATACCTTCTATCACTCTTCTGCTAAGATCTGATGAAGTAATTGATAAATATTTTGCTGCCCAAACTATGGCTAGTCTTGTTTGTAATGGTAATAAGGGAATAGATCTTGCCATTGCGAATTCTGGTGCTGTTGCTGGATTGATAACTATTATTGGGCATGTAGAGTCAGATATGCCTAATCTCATGGCTTTATCAGAAGAATTTTCTTTGGTACAAAACCCTGATCAAGTTGTTTTGGATCACCTTTTTGAAATTGAAGATGTAAAAGTGGGGTCTACCGCCAGGAAATCTATACCCCTCTTAGTGGATCTCCTGAGACCAATACCAGAAAGGCCTAGTGCTCCACCAGTTGCTGTTAGACTCTTGTTATCCATTGCAGATGGAAGTGATAGCAATAAATTAATCCTGGCTGAAGCTGGAGCTCTGGAAGCTTTGAACAAATACCTGTCCTTGAGTCCTCAAGACTCAACTGAGGCAGCTATTTCTGAGTTATTGAGAATATTATTTTGCAATTCTGACCTTATTAAACATGAAGCATCAACTAATTCATTGAACCAACTCATAGCAGTTTTGCGTCTCGGATCAAGAAATGCTAGATATAGTGCAGCAAGAGCACTTCATGAACTTTTTGATGCTGGCAACATTAGAGACTCAGAATTAGCTAAACAGGCCATTCAACCATTGGTTGACATGCTTAACACAACATCAGGTAATGAGCAGGAGGCTGCTCTCATGGCCTTGATCAAGTTAACTTCAGGAAATTCTTCAAAAGTATCTCTTCTTACTGATGTGGAAGGAAACCCACTTAAATGTTTATACAAAATACTGTCTTCTGCTTCATCCTTGGAACTGAAGAGCCATGCTGCGCAACTCTGCTTTGCTCTTTTTGGCAATAGCAAGATCAGAGCAGATCCAGTTGCCTCAGAATGCCTAGAACCCTTTATATCACTGATGCAATCTAATTCTGAGACTGCAATAGTATCTGGGGTTTGTGCTTTTGAGAGATTATTGGAAGATGAACAACAAGTAGAGCTTGCAGCAGCCTACAATGTTGTGGATCTCCTTGTGAGCTTGGTTTCTGGTACAAACTATCAGCTTATAGAGGCCGCCATATCTACTCTTATCAAATTGGGCAAAGACAGGACTCCAATTAAACTAGACATGGTGAAAGCTGGCATTATTAATAATTGTCTCAATCTACTACAATTAGCACCTAGCTCTCTATGCTCCACAATAGCTGAGCTGTTTCGCATTTTAACTAATAGCAGTGCAATTGCGAGAAGTTCAGATGCTGCAGAAATTGTAGAACCACTTTTCCATGTTTTGCTCCGCCGAGATTTCAACTTATGGGGACAGCATAGCGCCTTACAAGCACTTGTAAATATATTGGAGAAACCGCAAAGTCTTGCAACCTTGAAGCTTACTCCAAGCCAAGTTATTGAGCCCTTGATTTCTTTTCTGGAATCCCCATCCCAAGCTATTCAACAGCTTGGCACAGAACTGTTATCTCATCTTCTTGCACAGGAACATTTTCAGCAAGATATTACAACAAAGAATGCAGTTGTGCCCCTCGTACAGCTTGCAGGAATTGGAATATTAAACTTACAGCAAACAGCAATAAAAGCATTGGAAAAAATTTCCACAAGTTGGCCAAAGGCAGTTGCTGATGCGGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGAGCCTCAGCCACCACATGCGCTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATGTATTACATTCCAATGCCGATTACTATTTTAAAGTTCCTGTAGTGGTTCTTGTGAAACTTTTGCACTCAACACTTGAGAGTACAATTAGCATAGCCCTTAATGCTTTAATAGTTCATGACAGAAGCGATGCTTCAAGTGCTGAGCAGATGATGGAAGCTGGAGTTATAGATGCTCTGTTGGAACTTTTAAGATCTCATCATTGTGAAGAAGCATCTGGTAGATTACTAGAAGCTTTATTTAACAATGTGAGAGTACGAGAGATGAAGGTGTCTAAGTATGCTATAGCACCTTTATCCCAGTATCTATTGGATCCGCAAACCAGATCACAGTCTGGCAAGCTTCTTGCTGCTTTAGCTTTGGGAGATCTTTCCCAGCATGAAGGACATGCTAGATCTAGCGCCTCTGTTTCCGCATGTCGTGCATTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGAAGGTGGTGGCTATATGTGCATTGCAAAACTTTGTCATGAACAGCAGGACCAATAGACGAGCTGTTGCAGAAGCTGGGGGCATATTGGTGATTCAGGAATTGCTTCTGTCTCCAAACACAGAAGTTTCTGCACAAGCTGCTTTACTGATCAAATTTTTGTTTTCTACCCATACACTGCAAGAATACGTGTCAAATGAGTTGATCAGGTCTTTGACAGCTGCACTGGAAAGAGAGTTATGGTCAACTGCCACAATCAATGAGGAGGTTTTGAGAACTCTACATGTGATATTCATGAACTTCCCTAAGCTCCACACATCTGAAGCAGCAACTCTTTGCATTCCTCATTTGGTAGGGGCACTTAAATCTGGTGGTGAAGCGGCTCAGGACTCTGTACTTGACACGTTTTGCTTGCTAAGACAATCTTGGTCAACTATGCCTATAGATATAGCTAAGTCTCAAGCTATGATTGCTGCAGAAGCCATCCCCATATTGCAAATGCTCATGAAAACCTGCCCGCCTAGTTTCCATGAGAGGGCAGATACTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCACCATTAAGCGTGGAAACAACCTCAAACAAACTATGGGAAGCACAAATGCGTTCTGCCGGTTAACAATAGGCAATGGTCCTCCAAAACAAACCAAGGTAGTGAATCATAGTACTTCTCCAGAATGGAAAGAAGGATTCACTTGGGCATTTGATGTACCTCCGAAGGGCCAAAAGCTACATATCATATGCAAAAGCAAGAATACTTTTGGAAAGACAACACTTGGAAGAGTCACTATCCAAATTGATAAAGTTGTATCAGAGGGGGTTTATAGTGGATTATTCAGTCTTAATCATGATGGTAATAAAGATGGTTCTTCCCGAACACTTGAAATTGAGATTATATGGTCCAACAGGATTTCCAATGATGACATTTGA 6408 0.4154 MSKSPSHEQRQSNYSASQIGEFNEATGMDDPESTMATVANFVEQLHANLSSPVEKEIITAHLLGMARRRKDARALIGSHAQAMPLFISILRNGTPLAKVNVASTLSVLCKDEDLRLKVLLGGCIPPLLSLLNYESTDARKAAAEAIYEVSSGGLSDDHVGMKIFVTEGVVPTLWNQLNPKNKEDKIVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLSSDNAVSQSNAASLLARLMLAFSDSIPKVIDSGAVKALLQLVGQENDISVRASAADALEALSSQSTKAKKVIVNADGIPILIAAIVAPSNECMQGDGGQALQEHATRALANICGGMSALILYLGELSRSPRPDSPVGDIIGALAYTLMVFEEKVDVDEKHFGATQIEDILVTLLKPWDNNLIQERVLEAMASLYGNVCLSKWLIQADSKKVLIGLITMAATDVQEYLILSLTSLCCDKIGLWEAIKKREGIQLLISLLGLSSEQHQEYSVQLLAILTDQVDDSKWAITAAGGIPPLVQLLETGSQKAREEAANVLWSLCCHSEDIRACVESAGAIPAFLWLLKSGGPRGQEASAMALTKLVRVADSATINQLLALLLGHSPSSKTHIIRVLGHVLTMASQNDLLEKGSAANKGLRSLVQVLNSSNEETQEYAASVLADLFITRQDICDSLATDEIVLPCVKLLTSKTQVVATQSARALSALSRPTKNKAANKMSYIVEGDVKPLIKLAKTSSVDAAETAVAALANLLFDPFIAAEALAEDVVSALTRVLAEGTLEGKRNASRALHQLLKHFPVGDVLKGNAQCCFTVLALVDSLRAMDMDGTDAADALEVIALLARTKQGVNFTYPPWSALAEIPSSLELLVCFLAEGHSLVQDKAIKILSRLCGDQPVVLGELLSASSKSIGSLANRIMNSSSLEVKIGGSSLLICAAKEKKEFSMDSLDASGYLKPLIYSLVEMIKQNCSYSSLEIEVVTSKGFMERNSFQEVDEFDIPDPATSLGSTIAMWLLSVIASFHIKSKLTIMEAGGLEALFDKLARHTSNPQAEYEDTEGIWINALLLAILFQDENVILSPVTMRIIPSITLLLRSDEVIDKYFAAQTMASLVCNGNKGIDLAIANSGAVAGLITIIGHVESDMPNLMALSEEFSLVQNPDQVVLDHLFEIEDVKVGSTARKSIPLLVDLLRPIPERPSAPPVAVRLLLSIADGSDSNKLILAEAGALEALNKYLSLSPQDSTEAAISELLRILFCNSDLIKHEASTNSLNQLIAVLRLGSRNARYSAARALHELFDAGNIRDSELAKQAIQPLVDMLNTTSGNEQEAALMALIKLTSGNSSKVSLLTDVEGNPLKCLYKILSSASSLELKSHAAQLCFALFGNSKIRADPVASECLEPFISLMQSNSETAIVSGVCAFERLLEDEQQVELAAAYNVVDLLVSLVSGTNYQLIEAAISTLIKLGKDRTPIKLDMVKAGIINNCLNLLQLAPSSLCSTIAELFRILTNSSAIARSSDAAEIVEPLFHVLLRRDFNLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAIKALEKISTSWPKAVADAGGIFELAKVIIQDEPQPPHALWESAALVLSNVLHSNADYYFKVPVVVLVKLLHSTLESTISIALNALIVHDRSDASSAEQMMEAGVIDALLELLRSHHCEEASGRLLEALFNNVRVREMKVSKYAIAPLSQYLLDPQTRSQSGKLLAALALGDLSQHEGHARSSASVSACRALISLLEDQPTEEMKVVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSPNTEVSAQAALLIKFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLRTLHVIFMNFPKLHTSEAATLCIPHLVGALKSGGEAAQDSVLDTFCLLRQSWSTMPIDIAKSQAMIAAEAIPILQMLMKTCPPSFHERADTLLHCLPGCLTVTIKRGNNLKQTMGSTNAFCRLTIGNGPPKQTKVVNHSTSPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKTTLGRVTIQIDKVVSEGVYSGLFSLNHDGNKDGSSRTLEIEIIWSNRISNDDI* 2136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1205 2135 SMART C2_3c 2008 2104 IPR000008 -
Gso14g1205 2135 ProSiteProfiles C2 domain profile. 1988 2105 IPR000008 -
Gso14g1205 2135 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2006 2112 IPR035892 -
Gso14g1205 2135 CDD C2 2009 2099 - -
Gso14g1205 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Gso14g1205 2135 PANTHER - 10 2133 - -
Gso14g1205 2135 SUPERFAMILY ARM repeat 855 1127 IPR016024 -
Gso14g1205 2135 Gene3D - 1798 2003 IPR011989 -
Gso14g1205 2135 Gene3D - 858 1154 IPR011989 -
Gso14g1205 2135 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 10 2133 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Gso14g1205 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Gso14g1205 2135 Gene3D - 32 157 IPR011989 -
Gso14g1205 2135 SUPERFAMILY ARM repeat 72 310 IPR016024 -
Gso14g1205 2135 SMART arm_5 111 151 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 156 200 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 201 242 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 751 791 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 1834 1874 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 1288 1329 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 287 336 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 1416 1456 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 1708 1749 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 244 285 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 459 500 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 544 584 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 1543 1584 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 1375 1415 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 665 705 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 502 542 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 710 750 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 1206 1246 IPR000225 GO:0005515
Gso14g1205 2135 SMART arm_5 623 663 IPR000225 GO:0005515
Gso14g1205 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1173 1217 IPR000225 GO:0005515
Gso14g1205 2135 SUPERFAMILY ARM repeat 269 462 IPR016024 -
Gso14g1205 2135 MobiDBLite consensus disorder prediction 1 22 - -
Gso14g1205 2135 SUPERFAMILY ARM repeat 1557 1998 IPR016024 -
Gso14g1205 2135 Gene3D C2 domain 2007 2133 IPR035892 -
Gso14g1205 2135 SUPERFAMILY ARM repeat 443 887 IPR016024 -
Gso14g1205 2135 Gene3D - 1347 1588 IPR011989 -
Gso14g1205 2135 MobiDBLite consensus disorder prediction 1 30 - -
Gso14g1205 2135 SUPERFAMILY ARM repeat 1176 1544 IPR016024 -
Gso14g1205 2135 Gene3D - 368 630 IPR011989 -
Gso14g1205 2135 Gene3D - 1163 1346 IPR011989 -
Gso14g1205 2135 Gene3D - 1589 1797 IPR011989 -
Gso14g1205 2135 Gene3D - 158 353 IPR011989 -
Gso14g1205 2135 Gene3D - 631 825 IPR011989 -
Gso14g1205 2135 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Gso14g1205 2135 Pfam C2 domain 2008 2107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1205 Gso-Chr14 28247411 28258389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1205 373 789 U-box Gene Family AT3G46510 22.851 7.40e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1205 - - gmx:100780150 4017.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1205 14 28247411 28258389 Gso13g0150 13 10046095 10056985 GST