Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1197 ATGGAAGTAATGTGTGGTGCCAAAGTTGGCAAAATGGTCCATAAGGCCAAGCCATATGTGTTAACTGTGGGGTTGCAATTTGGGATGGCGGGGACATACCTCTTCACCATGGCCAGTTTGAACCATGGAATGAGTCGTTTGGTGTTCATTGTGTATCGCAATGCCATTGCGGCGCTGGCCCTTGCTCCCTTTGCCTTGATCTTTGAAAGGAAAGTTAGGCCAAAGATGACATGGACGGTCTTCATACAGATATTAGTACTTGGATTTCTTGAGCCAGTGGTTGACCAAGGATTCACTTTCTTGGGGATGCAATACACTTCAGCTTCCTTTGCGTCCGCTGTTATGAATGCCGTACCCTCCGTAACCTTTGTGCTTGCAGTAATTTTCAGGTTAGAGCGTATAAAAATAAGGGAATTACGCAGTCAAGCAAAAGTAATCGGAACCTTAGTAACCTTTGCTGGGGCATTGTTAATGACACTATACAAAGGCCCTCAGTTTGACCTATTTCATCATTCAAACACAGCCCACCAGCAAGGTGGAAGCCACTCCACTCAGAATCACTCACACTGGGTCGCCGGAACTCTCTTCATTTGCCTTGGTTGTCTGGCTTGGTCTTCCTTCTACATATTGCAGTCCATAACGGTGAAAAGGTACCCTGCGGAACTATCACTCTCATCCTTGATATGCTTTGCGGGTGCTTTGCAAAGTGCCGTGGTTGCTCTGATTGCAGATCATAACCCTCGAGCATGGGCTATCGGTTTCGACTACAGCCTCTATGGTCCTCTATACACTGGAATAATGAGTTCTGGAATAGCATATTATATACAAGGGTTGGTAATGCAAAGCAGAGGTCCAGTGTTTGTAACATCCTTCAATCCTCTTTGCATGATAATTGTTACTGCTTTGGGTTCCCTCCTTCTAGGAGAACACCTCTACCTGGGAAGCATCATTGGAGGCATCATTATCGCAGTGGGTCTATACTCTGTGGTGTGGGGAAAAGGCAAAGACTATAAAGAAGACATGTCATCACCAGCAACAACAAAAGAAACAGAAACAATGCAGCTTCCGATTACCTCACCAAATAATAAATAA 1092 0.4505 MEVMCGAKVGKMVHKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRLVFIVYRNAIAALALAPFALIFERKVRPKMTWTVFIQILVLGFLEPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVIFRLERIKIRELRSQAKVIGTLVTFAGALLMTLYKGPQFDLFHHSNTAHQQGGSHSTQNHSHWVAGTLFICLGCLAWSSFYILQSITVKRYPAELSLSSLICFAGALQSAVVALIADHNPRAWAIGFDYSLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSLLLGEHLYLGSIIGGIIIAVGLYSVVWGKGKDYKEDMSSPATTKETETMQLPITSPNNK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1197 363 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020|GO:0016021
Gso14g1197 363 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020|GO:0016021
Gso14g1197 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
Gso14g1197 363 PANTHER WAT1-RELATED PROTEIN 12 355 IPR030184 GO:0016021|GO:0022857
Gso14g1197 363 MobiDBLite consensus disorder prediction 340 363 - -
Gso14g1197 363 MobiDBLite consensus disorder prediction 346 363 - -
Gso14g1197 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Gso14g1197 363 PANTHER WAT1-RELATED PROTEIN 12 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1197 Gso-Chr14 28009236 28014956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1197 10 359 Nodulin-like Gene Family AT1G44800 49.429 4.42e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1197 - - gmx:100777641 693.73