Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1195 ATGTCCGATTCGAAGGTCGAAACCATCGCCAGATTAGCCCAATGGAAAATCGACAACTTCGGACCCTGCTCCTACAAGAAATCAGACCCTTTCAAGCTCGGAATTTGGAACTGGTTCATGTCCATAGAGAGGAACAGGTACCTCTACATACACATCTTTCCGGAGCCTTCTCGGCTTACTAAGGAACAGCCACCCGTGGCACGCTTCATCCTGCGAGTCTCCAACAACTCTGGCCCTACCCGCAAATTTTACATTTCCCCTGTTCATGAAAGGGTGCTTAGGACATGTGAAGACTTTGTCTGGCCTGTTGATACTGCATTCCTTGGTCGCTTCGTTATTGATATTGAATTTCTTGACCTGAGGACCTGCCCCGTGAATGGTGAAACCAGATCTGTATGGCCATCTGATGGAAAACTGCAAACTGTTGCAGCTCAAAGCACTCTTCGATGCTTGTCCCGTATGCTTGATGAGGCTATACATGCTGACCTCACCATTATCACTGCAGATGGTACCCTGAGGGCTCATAAGGCAGTTTTATCTGCAAGTTCTACTGTGTTCCATAGCTTGTATCTTCACAATGGTGATGAGAAAGAGACATCTACAATCCACATAGAAGATATGTCTCAAGAATCCTGCATGGCCCTTCTGAGTTACTTGTACGGCACTATAAAGCAACAAGATTTCTGGAAGCACAGGCTTGCATTGCTTGGAGCAGCCAATAAATATGAGATTGGTGATCTCAAAGATGCCAGTGAGGAAAGCCTACTGGAAGATCTTAACTCGGGAAATGTTCTGGATAGGCTAAATGATGCGAGGCTTTACCAGTTGCACAAGTTAAAGAAAGGATGTTTCTCATACTTATTTGATTTTGGTAAGATATATGATGTTAGAGATGAAATAGATACCTTTTTCCGACATGCAGATAGGGAGCTAATGCTGGAGATGTTTCAGGAAGTGCTTACAATTTCAAAATAG 975 0.4421 MSDSKVETIARLAQWKIDNFGPCSYKKSDPFKLGIWNWFMSIERNRYLYIHIFPEPSRLTKEQPPVARFILRVSNNSGPTRKFYISPVHERVLRTCEDFVWPVDTAFLGRFVIDIEFLDLRTCPVNGETRSVWPSDGKLQTVAAQSTLRCLSRMLDEAIHADLTIITADGTLRAHKAVLSASSTVFHSLYLHNGDEKETSTIHIEDMSQESCMALLSYLYGTIKQQDFWKHRLALLGAANKYEIGDLKDASEESLLEDLNSGNVLDRLNDARLYQLHKLKKGCFSYLFDFGKIYDVRDEIDTFFRHADRELMLEMFQEVLTISK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1195 324 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Gso14g1195 324 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Gso14g1195 324 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Gso14g1195 324 Pfam BTB/POZ domain 154 257 IPR000210 GO:0005515
Gso14g1195 324 SUPERFAMILY POZ domain 144 284 IPR011333 -
Gso14g1195 324 SMART BTB_4 161 259 IPR000210 GO:0005515
Gso14g1195 324 PANTHER OS08G0103600 PROTEIN 1 324 - -
Gso14g1195 324 PANTHER OS08G0495500 PROTEIN-RELATED 1 324 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1195 Gso-Chr14 27859116 27863879 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gso14g1195 BTB 4.1e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1195 K10523 - gmx:100775687 660.603