Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1192 ATGGAGGAAAATGTTCCACTTGAGGAAGTTTTTCAGAGGTGTGATTCAAATGGGCTAACAACAGAATCTGTTGAGGAGAGGCTGGTCATCTTTGGCCACAACAAACTTGAGGAGAAGAAGGAGAGCAAGGTTTTGAAGTTTTTAGGATTTATGTGGAATCCTCTTTCATGGGTCATGGAAGCTGCAACAATCATGGTCATTGCTTTGGCCGATGGAGAAATGACTATTGGGCCGAACTTAATCGAGACCATCAAGGAAATATGGTTCCCAAGGCTTCAACATTTCCTTCAGGAATCAAGGCTCTGGCTCATTATGTTCATTTCTTATGTTTTTGGAGAGGATGTAAGCTTTGGTGGGGTCTTCCGTTGCACTACTGGATTAGCAGACCAATTTGGTAAAAAGAGGGTTTTCAATACTCCACTTTGGGATGGCAAGACCCAACAACTTGGGCCAAAACTGTGGGAAATAGTTGGAGAACAACAGGGGATATTGAAGATAACTGGAATAGGTGAGCATGCTCACATTCGTACTTTTACCGAACACTCGACAAAGATATTGGCAGAAGAGAGCTACTCTATAGGTTTGTTATTCAGCTTTTATTTAATGTAA 609 0.4171 MEENVPLEEVFQRCDSNGLTTESVEERLVIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAATIMVIALADGEMTIGPNLIETIKEIWFPRLQHFLQESRLWLIMFISYVFGEDVSFGGVFRCTTGLADQFGKKRVFNTPLWDGKTQQLGPKLWEIVGEQQGILKITGIGEHAHIRTFTEHSTKILAEESYSIGLLFSFYLM* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1192 202 PANTHER PLASMA MEMBRANE ATPASE 3 73 - -
Gso14g1192 202 Pfam Cation transporter/ATPase, N-terminus 3 64 IPR004014 -
Gso14g1192 202 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Gso14g1192 202 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 109 141 IPR029061 -
Gso14g1192 202 Gene3D - 107 146 - -
Gso14g1192 202 PANTHER CALCIUM-TRANSPORTING ATPASE 3 73 - -
Gso14g1192 202 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 70 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1192 Gso-Chr14 27721814 27727097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1192 3 72 Primary Pumps ATPases AT3G60330 72.222 8.69e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1192 K01535 - gsj:114384584 402.134