Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1179 ATGGCTCACAATCACATCGCCACCGATTCACCTCTCTCTCGGCGCATAGTTCGTGCCTTCCTCTACTTCCTCAACTCTGGAATAGTTGAACCGGGTCCTGGGGTTGATGCTGAGGGCATTGAGGTTGCTAGGGAGTGTTTGGCAGAGGCTTTTAAGCTTAATTCATCTCCTGTGGCTGGTGATGATGTGAAATCTGATTCATTGATTGACATATTCAAGTCTCTTGAAGCTAACAAGCAATGTGAAACTAGTAAGTCAGACGTTGGTCCACTGCCGGATTCTGCGGATGCTTCAAGTTCATTCTTGGGTGAGAATCCTGCTCGTGGGAAGAATCATTCTGAGGCGTCGAAATCTACGGATGAAGATTCAACACAAGGCCCTCATGCTTTTGTATCTAAAGATGAACTGTGCGGACAATTCTTTGCTGCTCTGGAGAAAAATCACTATTTTTGGAGCAATACTGATGGGAGTGATGATCCTGGGCAACTGGAGAAAGCTAGTTGTTTATTCGATGAGGCTTGTATGGAAATGGAAAGATGTGATTGTCACCAATTTAGTTTGAAGAATTTGGCTGAATCACTAAAAACACTAGGTAACAAGGCAATGCAATCTAAGAAATACTCTGATGCAATTGAGTTGTATAATTGTGCCATTGCAGTCCATGAAAAGAGTGCTGTTTACTACTGCAACAGGGCAGCTGCTTACACTCAGATTAACAAATATACAGAAGCAATCCAAGATTGTCTTAGATCCATTGAGATTGATCCAAACTATACCAAGGCATACAGTCGTCTGGGTTTGGTTTATTATGCACAAGGAAATTACAGAGATGCTATTCATAAAGGCTTTAGAAAAGCCTTGCAGTTGGATCCCAATAATGAGTCTGTCAAAGAAAATATACGGGTGGCTGAGCGTAAATTACTAGAAGAGCAACACCGTGCATATCCCAACCAGCTAAACATTTTTTTCCTCTTTCATTCTCTAAAGAATACAAGATCATCTCAAGAATTCCCAAACCAATCTGCACAAGGAGGATCAAGAAGCCATGGCGAGCCACCTCCATTTTCCTCTATGCCGTTTAACCCCCGTGATATTGCAAGCATGTTCATGAACTTCACGAACGCTACAAATGCACAGCAGCAGGGGTCACATTCTCAGGAAAGGCAAGAAGATAGCAATGGTAGTGGAGCTAGTGAGCCTGAAATAAGAATTGGGGGAAATATTAGTGTAAACATGGAGGACATGCCAGAGGATATAACAGGGGCCTTTCAATCTATGATGGAAATGTTATCTGGGGCTGCACCCCCCGGGCAACCGCAAGATCAAATGAATGGAAGAGCAGCACCAAACTAA 1353 0.4309 MAHNHIATDSPLSRRIVRAFLYFLNSGIVEPGPGVDAEGIEVARECLAEAFKLNSSPVAGDDVKSDSLIDIFKSLEANKQCETSKSDVGPLPDSADASSSFLGENPARGKNHSEASKSTDEDSTQGPHAFVSKDELCGQFFAALEKNHYFWSNTDGSDDPGQLEKASCLFDEACMEMERCDCHQFSLKNLAESLKTLGNKAMQSKKYSDAIELYNCAIAVHEKSAVYYCNRAAAYTQINKYTEAIQDCLRSIEIDPNYTKAYSRLGLVYYAQGNYRDAIHKGFRKALQLDPNNESVKENIRVAERKLLEEQHRAYPNQLNIFFLFHSLKNTRSSQEFPNQSAQGGSRSHGEPPPFSSMPFNPRDIASMFMNFTNATNAQQQGSHSQERQEDSNGSGASEPEIRIGGNISVNMEDMPEDITGAFQSMMEMLSGAAPPGQPQDQMNGRAAPN* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1179 450 MobiDBLite consensus disorder prediction 83 128 - -
Gso14g1179 450 MobiDBLite consensus disorder prediction 334 363 - -
Gso14g1179 450 Gene3D Tetratricopeptide repeat domain 186 358 IPR011990 GO:0005515
Gso14g1179 450 MobiDBLite consensus disorder prediction 429 450 - -
Gso14g1179 450 MobiDBLite consensus disorder prediction 377 403 - -
Gso14g1179 450 ProSiteProfiles TPR repeat profile. 191 224 IPR019734 GO:0005515
Gso14g1179 450 PANTHER LD24721P 9 447 - -
Gso14g1179 450 Gene3D Immunoglobulin FC, subunit C 1 78 - -
Gso14g1179 450 Pfam TPR repeat 234 273 - -
Gso14g1179 450 PANTHER LD24721P 9 447 - -
Gso14g1179 450 ProSiteProfiles TPR repeat profile. 259 293 IPR019734 GO:0005515
Gso14g1179 450 MobiDBLite consensus disorder prediction 377 396 - -
Gso14g1179 450 ProSiteProfiles TPR repeat profile. 225 258 IPR019734 GO:0005515
Gso14g1179 450 SUPERFAMILY TPR-like 190 304 IPR011990 GO:0005515
Gso14g1179 450 Coils Coil 293 313 - -
Gso14g1179 450 SMART tpr_5 259 293 IPR019734 GO:0005515
Gso14g1179 450 SMART tpr_5 191 224 IPR019734 GO:0005515
Gso14g1179 450 SMART tpr_5 225 258 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1179 Gso-Chr14 27390765 27413489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1179 190 289 U-box Gene Family AT3G07370 30.000 1.73e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1179 K16365 - gmx:100775346 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1179 14 27390765 27413489 Gso13g0555 13 18580671 18596010 GST