Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1159 ATGGTTAAGTCAGAGAACAAGATCCACCCAGAACAACCATCATCATCATCATCAAAGCCAATGAGACCATTATCATCATCAAGTGACAACAAGAAGAAGAAGTACAAGGGGGTGAGAATGAGAAGCTGGGGGTCATGGGTGTCAGAGATTAGAGCACCAAACCAAAAGACAAGGATATGGTTGGGATCTTATTCAACTGCTGAAGCAGCAGCAAGAGCCTATGATGCTGCACTTCTATGCCTCAAAGGCTCCTCAGCCAATCTCAACTTCCCTTCTTCAAGCTCCTCCTCACAACACTATATCATCCCTCAAGACACTGCCATGATGTCCCCAAAATCAATCCAAAGAGTTGCTGCTGCTGCTGCCAACAATTTCTTGGACAATAATGCTATTGCTATTAATAATGCTACCACCCCACCTTCTCCTCCTCTTGCTTCAACCTCTTCTTCATTTGTATCGTCACCATCAATGTCATCATCATCTCCTTTAGACCAAATTGATGATGATGTCTCTCTTCTGACACCATTTGGGGCCTACACTACTACTACTGCTACTACTATCTGTGACGAAACAAATGAATCAATGGCCATGATGGAATCTTGGTATGACTTGGAGGGGTTGCAATCCCCAAAGTATGTTGATCAAATGCTAAGTGGGGCATTCTTTGACATTGATTCAACACAGTTGCTTGATGATCTGTATGAAGAAAGTGACATTCGCTTGTGGAGTTTCTGCTGA 738 0.4322 MVKSENKIHPEQPSSSSSKPMRPLSSSSDNKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSSSQHYIIPQDTAMMSPKSIQRVAAAAANNFLDNNAIAINNATTPPSPPLASTSSSFVSSPSMSSSSPLDQIDDDVSLLTPFGAYTTTTATTICDETNESMAMMESWYDLEGLQSPKYVDQMLSGAFFDIDSTQLLDDLYEESDIRLWSFC* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1159 245 CDD AP2 37 91 IPR001471 GO:0003700|GO:0006355
Gso14g1159 245 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 245 - -
Gso14g1159 245 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Gso14g1159 245 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Gso14g1159 245 MobiDBLite consensus disorder prediction 1 36 - -
Gso14g1159 245 MobiDBLite consensus disorder prediction 8 25 - -
Gso14g1159 245 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Gso14g1159 245 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Gso14g1159 245 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Gso14g1159 245 MobiDBLite consensus disorder prediction 137 164 - -
Gso14g1159 245 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
Gso14g1159 245 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Gso14g1159 245 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 14 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1159 Gso-Chr14 26586574 26587868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1159 35 244 AP2-EREBP Transcription Factor Family AT1G21910 49.091 2.51e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso14g1159 AP2 5.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1159 - - gmx:100813313 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1159 14 26586574 26587868 Gso13g0568 13 18983909 18985153 GST