Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1150 ATGAGAGTTTCCACCCAGAATAATTCCGAGACGGAGAGTAGTTCTACCTCATTCTTACCACCATCACCATCACCATCACCGTCGTCACCACCGTCATCCGAATTCAAGACGGAGAAACGCAACCGCGAGTCGAACAAGCACCCCGTGTACCGAGGGGTGCGCATGCGGAACTGGGGAAAATGGGTGTCCGAAATCCGCGAGCCCCGGAAGAAATCGCGGATATGGCTGGGCACATTCCCCACGCCGGAAATGGCGGCGAGGGCGCATGACGTGGCAGCACTAAGCATAAAGGGGAACAGCGCCATTCTCAACTTCCCCGAACTCGCGGCCTCGCTCCCTCGTCCGGTGTCCTTGGCTCCCCGCGATGTCCAGGCCGCGGCAGCCAAGGCGGCCCACATGGACCTGCCTTCTACTTCATCTTCCATTTCATCGTCTTTGGTTCCAACTACTCAGTCCGCGTCCTCGTCATCTTCTTCTCTATCGTCGTTGACTTCCGCTGACTTGTTGCCCACTGCCTCCGAAGAACTGAGCGAGATCATCAAGTTGCCGAGGCTGGAAACAACGAGTTACGAGCTGGGGAACGAGTTTGTGTTCATGGACTCGCAGGACGCGTGGATGTATCAGCCACCGATACCGTGGTTGCATACTACCTACGACGGTTCTGATGCAGATGAGTTTGTAGTGCCAGAGAGTGGGGTTGTGACTAGTTTTGAGAGTTTTCTGTGGGACTACTGA 735 0.5565 MRVSTQNNSETESSSTSFLPPSPSPSPSSPPSSEFKTEKRNRESNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAASLPRPVSLAPRDVQAAAAKAAHMDLPSTSSSISSSLVPTTQSASSSSSSLSSLTSADLLPTASEELSEIIKLPRLETTSYELGNEFVFMDSQDAWMYQPPIPWLHTTYDGSDADEFVVPESGVVTSFESFLWDY* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1150 244 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Gso14g1150 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 243 - -
Gso14g1150 244 CDD AP2 50 108 IPR001471 GO:0003700|GO:0006355
Gso14g1150 244 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Gso14g1150 244 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Gso14g1150 244 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Gso14g1150 244 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Gso14g1150 244 MobiDBLite consensus disorder prediction 1 19 - -
Gso14g1150 244 MobiDBLite consensus disorder prediction 1 51 - -
Gso14g1150 244 MobiDBLite consensus disorder prediction 134 162 - -
Gso14g1150 244 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 6 243 - -
Gso14g1150 244 MobiDBLite consensus disorder prediction 35 50 - -
Gso14g1150 244 Pfam AP2 domain 48 98 IPR001471 GO:0003700|GO:0006355
Gso14g1150 244 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1150 Gso-Chr14 26145211 26147170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1150 11 219 AP2-EREBP Transcription Factor Family AT5G11590 60.465 1.65e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso14g1150 AP2 2.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1150 K09286 - gmx:100305349 399.438