Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1131 ATGCCTACCGCTTGGATCTTCGATCCTTTGCTAAGGAGGACTACTGGCCCTACAAGGCGTTCTACAAAGGGGCAATGGACATCAGAGGAGGATGATATCTTACAGAACGCTGTTGAGAGATTTAAAGGAAAAAATTGGAAAAAAATTGCGGAATGTTTCAAGGATAGAACTGATGTGCAATGCCTACATAGGTGGCAGAAAGTTTTAAATCCTGAACTTGTTAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATTATTGAATTGGTGAAGAAACATGGGCCTAAAAAGTGGTCAACTATTGCACAACATTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGGTTAATCATCTTGATCCTACTATTAAAAAGGAAGCATGGACTCGGGAAGAGGAGTTGGCTTTAATACATTATCATCAGATTTTTGGGAACAAATGGGCCGAATTGTCAAAGGTCATTCCTGGAAGGACAGACAATGCTATTAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTATTTGGCATCAGGTCTGCTTACTCAGTTCGAATCTATACCTCCTCATGCTGGAAATTTGAATCAACCAATAAGATTGCAGTGTAGTGGAGATGATAATGGTTCCAAGTGGACTGAAGGAGAGGAAATTTCAGATTACAGCCAAGGTTCAGCTAATGCTGTTTACTTTCCATCTGCTACAGGGACTAGCAGTGCTGACTTACAAACTGGAGAGGCATATAGGAAAAATGAAGAATGTAGTCTTGGAAAGGATCATTGTCCGAATCAAGTATCTTGTTCAGAGCCATATTACGTATCAAATGATGATGTTTCTATATGCATCCCAGAAATTGCTCACCAAGAGGCTTGCACTTCTCAATTTGTTGAGCAACAGTCACATGAACCTGGAAATTCCATTTGTGGGGATTGTCAATTCAATTTTCAATCCTCACCCAATGTTTCATCAATGGTCTTGGGGCAGGAATCGTCGGAGTTGCAAAGAGATTTTATAGCTCCTAGTGAAATCTGTGACATGGTGAATGTTCCATTTCCGACTTCAGTGGAGTTAGGTGTTTCAACGTCCATGGGAACTGCATCTATGGATTCTCTAAAACCAGAGCACATGTTGATATCTGATGATGAATGTTGTAGAGTCCTGTTTTCAGACGCAATGAATGATGGGTGTTTTCCTCCTGTAGATTATAATAAAAGTGAAGATATAGCTGAATTTTCTGGATACTGTTCATTTTGTCGATCTTGTAATATCCAGATATCCGAAACTGGTGGAACCTCAACTGCAAAGCTAACTTGTCCTCAGTGTTCTAATAATTATAAAGGAATTTCATCCTCCCAATCTGTCCCTCCAGTACTTTCCATTAGAGATGATAGGTTGGGCCCTAGTGCCAACAGCAATCAATTATTTGTGACGGAGGATCACCACTTTGTCTCCAGAGCATCTGCTAACTTCACTTATCTGAACGACATATCCTGTTCTCCTTGTGTTGATGGTATAGGTAGTGCAGTAATGGAAAAAACAAATGTGCATACAGAAAAGGAGGACTCAGGATCTCTATGTTATGAACCTCCCCGCTTTCCAAGTTTGGATATTCCTTTCTTCAGCTGTGATCTTGTACAATCTGGGAGTGATATGCAGCAAGAGTTTAGTCCCTTGGGTATCCGCCAGTTTATGATGTCATCTATGAACTGTCTTACTCCTTTCAGGTTGTGGGACTCGCCCTCTCGTGATGATAATCCAGATGCATTGTTAAAAAGTGCTGCTAAAACTTTTACAGGTACACCATCCATATTAAAGAAAAGATCCCGAGATTTGTTGTCACCACTCTCAGATAAAAGAATGGATAAGAAACTTGAGACTGACATAACATCTTCTATGTTTACCAGAAACTTTTCCAGTTTGGATGTCACATTTGGTGACAATGAGACTCGAAAAGCAGATATGCCTTCATCTTCATTGCAAACACAGAACAGCAGGGCATCTGTTGATGATGATAATAAAGAAAATTGTGGACAAACTTATAAAGGGGAACAAGTATTGGAGCCAATTAAATCTGCAATTTTGGATGAAAAGAACTCTCAGAAAGGTACTGTTGATGGTAATTCTCAGCATAATGTCAAGCAACAACCTCTTGATTCTAAAATGAAGATTAATGCAGCTGCTGGGATTGAGCAACAACAATCTGGAGTTTTGGTTGAACATGATGTGAATGACCTGTCACTGTCTTCTCCTGATCAAGTTGGTTTAAATTCAGACAGAGGTCTGGATTCAAGTGCTAAAACTCCAAAAAGCTTGAACAAGTCCTTGGAAGCAGCTTCAAATCAGAGTGGCCATTTGAAATTATCTTCCAAAAGTCCATGCCCAAGGGTTAATTCTTGTTCTCCTTGTGTTCGTGCTAAGGAGCATGAAGGACTTTCAGTTGCTGTTACTCGTGTACAAGCTCCAGGAGACAATTCTGGGGAACAAACCAGAAGAGATGGTGGTTTTGAAACAAGTAGCATCTTCGGTGGAACACCTTCTGCATGGAAATCCCCTTGGTTCTTCAACACTTTTCTATCTAGCCCCAGACTTGATACCGAAATTCTAATTGAGGATTTTGGGTATTTTATGAGTCCAGGTGATAGAAGCTATGATGCTCTCGGGTGGTTGAAACAGGTCAGTGATCAAACTGCTGCCACATATGCCAATGCTCAGGAGATTCTAGCAAATGGAACTCCTAAGGCATTACCGAAAGATGCATCTGAAAACGACAAGGATAGGGACCATGAAAATAATTACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTGATAGAGCGACGAACACTTGACTTTAGTGAATGTGAAACACCAGGCAGGGGTGATAACAGCAAATCCTCAGCTATGAGCTTCTCAAGCCCTTCTTCGTACTTGATGAAAGGTTGTAGATGA 2973 0.406 MPTAWIFDPLLRRTTGPTRRSTKGQWTSEEDDILQNAVERFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIELVKKHGPKKWSTIAQHLPGRIGKQCRERWVNHLDPTIKKEAWTREEELALIHYHQIFGNKWAELSKVIPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQFESIPPHAGNLNQPIRLQCSGDDNGSKWTEGEEISDYSQGSANAVYFPSATGTSSADLQTGEAYRKNEECSLGKDHCPNQVSCSEPYYVSNDDVSICIPEIAHQEACTSQFVEQQSHEPGNSICGDCQFNFQSSPNVSSMVLGQESSELQRDFIAPSEICDMVNVPFPTSVELGVSTSMGTASMDSLKPEHMLISDDECCRVLFSDAMNDGCFPPVDYNKSEDIAEFSGYCSFCRSCNIQISETGGTSTAKLTCPQCSNNYKGISSSQSVPPVLSIRDDRLGPSANSNQLFVTEDHHFVSRASANFTYLNDISCSPCVDGIGSAVMEKTNVHTEKEDSGSLCYEPPRFPSLDIPFFSCDLVQSGSDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSRDDNPDALLKSAAKTFTGTPSILKKRSRDLLSPLSDKRMDKKLETDITSSMFTRNFSSLDVTFGDNETRKADMPSSSLQTQNSRASVDDDNKENCGQTYKGEQVLEPIKSAILDEKNSQKGTVDGNSQHNVKQQPLDSKMKINAAAGIEQQQSGVLVEHDVNDLSLSSPDQVGLNSDRGLDSSAKTPKSLNKSLEAASNQSGHLKLSSKSPCPRVNSCSPCVRAKEHEGLSVAVTRVQAPGDNSGEQTRRDGGFETSSIFGGTPSAWKSPWFFNTFLSSPRLDTEILIEDFGYFMSPGDRSYDALGWLKQVSDQTAATYANAQEILANGTPKALPKDASENDKDRDHENNYPANQPGNHSQLASNALIERRTLDFSECETPGRGDNSKSSAMSFSSPSSYLMKGCR* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1131 990 SMART sant 22 71 IPR001005 -
Gso14g1131 990 SMART sant 74 123 IPR001005 -
Gso14g1131 990 SMART sant 126 174 IPR001005 -
Gso14g1131 990 MobiDBLite consensus disorder prediction 751 799 - -
Gso14g1131 990 MobiDBLite consensus disorder prediction 650 687 - -
Gso14g1131 990 MobiDBLite consensus disorder prediction 751 802 - -
Gso14g1131 990 MobiDBLite consensus disorder prediction 821 841 - -
Gso14g1131 990 Gene3D - 128 187 - -
Gso14g1131 990 CDD SANT 129 169 IPR001005 -
Gso14g1131 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 69 IPR017930 -
Gso14g1131 990 ProSiteProfiles Myb-like domain profile. 70 121 IPR001005 -
Gso14g1131 990 CDD SANT 26 69 IPR001005 -
Gso14g1131 990 Gene3D - 75 126 - -
Gso14g1131 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 125 IPR017930 -
Gso14g1131 990 SUPERFAMILY Homeodomain-like 72 168 IPR009057 -
Gso14g1131 990 MobiDBLite consensus disorder prediction 820 841 - -
Gso14g1131 990 ProSiteProfiles Myb-like domain profile. 18 69 IPR001005 -
Gso14g1131 990 SUPERFAMILY Homeodomain-like 24 79 IPR009057 -
Gso14g1131 990 MobiDBLite consensus disorder prediction 957 990 - -
Gso14g1131 990 PANTHER MYB PROTEIN-RELATED 13 989 - -
Gso14g1131 990 Pfam Myb-like DNA-binding domain 75 121 IPR001005 -
Gso14g1131 990 Pfam Myb-like DNA-binding domain 23 69 IPR001005 -
Gso14g1131 990 Pfam Myb-like DNA-binding domain 127 169 IPR001005 -
Gso14g1131 990 ProSiteProfiles Myb-like domain profile. 122 172 IPR001005 -
Gso14g1131 990 CDD SANT 77 121 IPR001005 -
Gso14g1131 990 MobiDBLite consensus disorder prediction 650 669 - -
Gso14g1131 990 MobiDBLite consensus disorder prediction 966 984 - -
Gso14g1131 990 MobiDBLite consensus disorder prediction 912 944 - -
Gso14g1131 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 176 IPR017930 -
Gso14g1131 990 MobiDBLite consensus disorder prediction 920 934 - -
Gso14g1131 990 Gene3D - 22 74 - -
Gso14g1131 990 PANTHER TRANSCRIPTION REPRESSOR MYB5 13 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1131 Gso-Chr14 24206486 24216051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1131 13 990 MYB Transcription Factor Family AT4G32730 41.475 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso14g1131 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1131 - K09420 gmx:100786044 1997.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1131 14 24206486 24216051 Gso4g0689 4 6731564 6738292 PCT
Gso14g1131 14 24206486 24216051 Gso6g0690 6 6378233 6384933 PCT
Gso4g0689 4 6731564 6738292 Gso14g1131 14 24206486 24216051 PCT
Gso6g0690 6 6378233 6384933 Gso14g1131 14 24206486 24216051 PCT