Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1103 ATGCAAAAAGACAAGGAAGTTATTACCAAAGAGGGTAAGGATATTGAAATGGAAGGGAATCATGAGAAGGAGGAAACCCTCCCACCAGGATTTCGGTTTCATCCGACCGATGAAGAACTCATCTCTTACTATCTTACAAACAAGATTTCAGATTCTAATTTTACAGGCAAAGCAATAGCTGATGTAGATCTCAACAAATGTGAGCCATGGGAGCTTCCGGAGAAGGCGAAAATGGGACAAAAAGAATGGTACTTCTTCAGTCTAAGAGATCGTAAGTACCCAACGGGTGTTAGAACCAACCGAGCCACGAACACAGGGTACTGGAAAACCACAGGAAAAGACAAAGAGATCCTCAACAGTGCTACATCGGAGTTGGTTGGTATGAAGAAGACTTTGGTTTTCTACAAAGGCAGGGCTCCCAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATACCGCATTCATTCAAAATCCAGCAGCTTCAGAACCAACAAGCAGGATGAATGGGTGGTTTGCAGGGTATTCCGCAAGAGTGCTGGTGCAAAAAAGTTCCCCTCTTCCAGCCACATCAGAGCATTGAATCTGAATCCTTTTAGTCTGGAAGTTGGCCCTAGCATTATGCCACCACCACCAATGATGCACCTTGCAGACCCTGCTGCTGCTGCTCATTTCCTTTATGGAAGAAACTACATGATGAACCCTTCAGAGGTAGCTGAAGTGACTAGGGTTTTGAGAGGTGGTGGACCCACAAATGTGAATGTGATGAACATGAACTTACCAATGCAATACTCTCATTTGAACAACCCAGTAGCAGGAGGAGGAGGAGAAGGGTTTACTATTTCTGGCCTTAATTTGAATCTGGGAGGAACAGTTGCTACTACCACCGCACAAGCACAACAATCCCTTTTGAGGCCAATGATGCCACCACCACAGCCATCTCCTGCTCACACAATTGCCCAAGTGCATCATGACTTCAGTTCCAACATGGTGACACCCAATATTGCTCTTGCTGCTGACAATGTAGGGTATGGTGGAGAAGTGGCCAGTGCAAATTCTCATGGCAATAGGTACATGGGCATGGACCATTGCATGGATCTTGACAATTACTGGCCTTCCTACTAA 1122 0.4554 MQKDKEVITKEGKDIEMEGNHEKEETLPPGFRFHPTDEELISYYLTNKISDSNFTGKAIADVDLNKCEPWELPEKAKMGQKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSSFRTNKQDEWVVCRVFRKSAGAKKFPSSSHIRALNLNPFSLEVGPSIMPPPPMMHLADPAAAAHFLYGRNYMMNPSEVAEVTRVLRGGGPTNVNVMNMNLPMQYSHLNNPVAGGGGEGFTISGLNLNLGGTVATTTAQAQQSLLRPMMPPPQPSPAHTIAQVHHDFSSNMVTPNIALAADNVGYGGEVASANSHGNRYMGMDHCMDLDNYWPSY* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1103 373 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 370 - -
Gso14g1103 373 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 11 370 - -
Gso14g1103 373 MobiDBLite consensus disorder prediction 1 31 - -
Gso14g1103 373 SUPERFAMILY NAC domain 24 177 IPR036093 GO:0003677|GO:0006355
Gso14g1103 373 ProSiteProfiles NAC domain profile. 27 177 IPR003441 GO:0003677|GO:0006355
Gso14g1103 373 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Gso14g1103 373 Gene3D NAC domain 36 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1103 Gso-Chr14 22432458 22436336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1103 18 373 NAC Transcription Factor Family AT2G24430 51.451 2.62e-117 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso14g1103 NAM 5.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1103 - - gmx:100811175 747.658