Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1099 ATGGAGTCCAAGTGGGGTGGCGCCCCCGCCAGCATCATGGCGGCGAATTTCGACGACTTCAAGTGGATCGCCTCCATGTTCGATCCCGGAAACGACGACGTCAAGCCCTTCTCCGACGCAGCTTTCCAAAACCAGGATGCAGTAACTGCATTTTCAACTTGTGGTGGAGTAACAGATGATACCCTTGTTCGTTCCCAAAACCTCACTCCCATTCAATCCACCATTTCTGCAACTATTGATTCTCAGTCTTCCTTTTGTGGTACCGTTGGGAGCCCAGTGTCTGCTAACAAACCAAACGTGAGAGATAATCAAGTAAAAGGGGTCGCCACCACTACAAGTGGTTCCTCACGTGAGCCATCTGATGAGGATGATGAAGCAGGTCCTTGTGAACAAAGCACAAACGCTATTGATATGAAGCGCCTTAGAAGGAAGGTTTCTAATAGAGAGTCTGCAAGGAGGTCCAGGAGAAGAAAACAAGCCCATTTGGCTGACCTGGAGTGGCAAGTTGAACGGCTGAGACTGGAAAATGCAAACCTATTTAAGCAGCTTACAGATGCCAGCCAACAATTTCGTGACGCTGATACGAATAACCGAGTCCTAAAATCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAATTAGCTGAGGATATGGTCACTCGTGGCACACTCACCCCTATCAACAACCAGATTCTTCAAAATCAGAGTTCACTAAACACCCCACCTCAACTCAACACAAATAATCTACACCGCATGACACATGTTTCGCCAACCATCACCGTCCGTGGGAATGATGATGCTTCATATGGAGGTGGAATTACAGTTAGTGGACAAAATTCACCTCTTGGTGGGCTTGGAAACTTGGATAATATTCCTTGCAGCGATTTCAATAGTGGAATCAATAGTAATAATGCTGTGAGCTCTATGACTAGCATGTGGCCTTAA 942 0.466 MESKWGGAPASIMAANFDDFKWIASMFDPGNDDVKPFSDAAFQNQDAVTAFSTCGGVTDDTLVRSQNLTPIQSTISATIDSQSSFCGTVGSPVSANKPNVRDNQVKGVATTTSGSSREPSDEDDEAGPCEQSTNAIDMKRLRRKVSNRESARRSRRRKQAHLADLEWQVERLRLENANLFKQLTDASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVTRGTLTPINNQILQNQSSLNTPPQLNTNNLHRMTHVSPTITVRGNDDASYGGGITVSGQNSPLGGLGNLDNIPCSDFNSGINSNNAVSSMTSMWP* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1099 313 SMART brlzneu 135 199 IPR004827 GO:0003700|GO:0006355
Gso14g1099 313 PANTHER BASIC LEUCINE ZIPPER 63 31 313 - -
Gso14g1099 313 SUPERFAMILY Leucine zipper domain 139 189 IPR046347 GO:0003700|GO:0006355
Gso14g1099 313 MobiDBLite consensus disorder prediction 86 116 - -
Gso14g1099 313 PANTHER BASIC LEUCINE ZIPPER 9 31 313 - -
Gso14g1099 313 Gene3D - 138 194 - -
Gso14g1099 313 Pfam bZIP transcription factor 138 185 IPR004827 GO:0003700|GO:0006355
Gso14g1099 313 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 137 200 IPR004827 GO:0003700|GO:0006355
Gso14g1099 313 Coils Coil 197 217 - -
Gso14g1099 313 Coils Coil 155 189 - -
Gso14g1099 313 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 142 157 IPR004827 GO:0003700|GO:0006355
Gso14g1099 313 CDD bZIP_plant_GBF1 140 191 IPR045314 GO:0003700|GO:0006355
Gso14g1099 313 MobiDBLite consensus disorder prediction 86 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1099 Gso-Chr14 21890124 21896915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1099 60 313 bZIP Transcription Factor Family AT5G24800 50.193 2.30e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso14g1099 bZIP_1 1.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1099 K25784 - gmx:778193 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0668 4 6514825 6520721 Gso14g1099 14 21890124 21896915 PCT
Gso6g0669 6 6175790 6180810 Gso14g1099 14 21890124 21896915 PCT