Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1088 ATGGCTCTTAGAAGAGCATACTATTGCCTTCTTACGCTTTTGGTGTTCGCCCTATGTTTTGAGCCATTGTTGGGAGACACAGATGCTCAAATTTTGATGAGGTTCAAAGCTTCCTTGTCCAATAACAATGCCTTAAACAACTGGGTGAATGAGTCTAGTTTATGTAGTTGGAGAGGTTTGTTATGCAACCACACTGACCAAACATTTTATGGCTTGAGACTACACAATATGAGTCTAGGTGGGAAGATTGATGTAGACACCTTGTTGGAATTGCCAACTTTGACAAGCTTTAGTGTCATGAACAATACATTTGAGGGTCCAATGCCTGAGTTCAAAAAGCTTGTGAGGTTAAGGGCATTGTTTCTGTCCAACAATAAATTCTCTGGCGATATTCCGGATGATGCTTTTGAGGGCATGACAAAACTGAAAAGGGTTTTCTTGGCAGAGAATGGCTTCACGGGTCATATTCCTAAGTCACTTGCTAACTTGCCTAGACTTTGGGATTTGGACTTGCGTGGGAATAGTTTTGGAGGAAGCATACCAGAGTTTCAACAAAAGGATTTCAGAATGTTTAATTTGTCGCATAACCAATTGGAAGGTTCAATACCAGAAAGCTTAAGCAACAAGGATCCAAGTTCATTTGCTGGCAACAAAGGCCTATGTGGAAAACCGATGAGTCCGTGCAATGAGATTGGTGGCAACGAGTCTAGATCAGAGATTCCCTACCCTGATTCATCTCAAAGAAAGGGAAACAAATACCGAATCCTTATAACCGTCATTATAGTGATCGTAGTGGTTGTTGTTGCTTCAATAGTAGCACTTCTATTTATCCGTAACCACTGGAGAAAAAGGTTGCAACCCTTAATATTAAGCAAGCAGGAGAATTCCAAGAACAGTGTAGACTTCAGGGAGTCACAATCCATTGATGTGACAAGTGATTTCAAGAAGGGTGGTGATGGGGCATTGAACTTTGTTAGGGAAGACAAAGGGGGGTTTGATTTGCAAGACCTGCTTAGAGCCTCTGCCGTGGTTCTTGGTAGTGGCAGTTTCGGGTCCACATACAAGGCTATGATTTTGAATGGACCAACTGTGGTTGTGAAGAGGTTTAGGCACATGAACAATGCTGGGAAACAAGAGTTCATTGAGCACATGAAAAGGCTTGGAAGTTTGACACACCCTAATCTTCTCCCCCTTGATGCATTCTACTACAGAAAAGAAGATAAGTTTTTGGTTTATGACTATGCCGAAAATGGCAGCTTGGCCAGTCATCTACATGATAGAAATGGCTCAGTGCTAAACTGGTCAACCCGTTTGAAAATCGTAAAAGGAGTAGCTAGAGGCTTAGCATACCTCTACGAAAGCTTCCCTGGCCAAAATCTACCGCATGGCCATCTCAAGTCCTCCAATGTTGTTTTGGACCATTCATTTGAGCCACACTTGACAGAGTATGGCCTTGTGCCAGTGATGACCAAGAGTCATGCTCAGCGGTTCATGGCGGCCTACAAGGCCCCAGAGGTGAACCAATTTGGAAGGCCAAATGTGAAAAGTGATGTGTGGTGTCTGGGGATCCTCATTCTGGAGCTTCTAACAGGGAAGTTCCCAGCAAATTATCTGAGGCATGGGAAGGGTGGGAACAATTCTGACTTGGCAACATGGGTGGACTCAGTAGTGAGGGAAGAGTGGACTGGTGAGGTGTTTGATAAGGACATTATGGGGACCAGGAATGGGGAGGGTGAGATGCTGAAGCTGCTGAGGATTGGAATGTTTTGCTGCAAATGGAGTGTGGAGAGTAGGTGGGATTGGAGGGAGGCACTGGCAAAGATTGAGGAGTTAAAGGAGAAGGATAGTGATGAAGAATACTCTTCTTATGTCAGTGAAGGGGATTTGTATTCAAGGACTATGACTGAAGATGAGTTCTCTTTTTCTGTCACTAATTGA 1938 0.4376 MALRRAYYCLLTLLVFALCFEPLLGDTDAQILMRFKASLSNNNALNNWVNESSLCSWRGLLCNHTDQTFYGLRLHNMSLGGKIDVDTLLELPTLTSFSVMNNTFEGPMPEFKKLVRLRALFLSNNKFSGDIPDDAFEGMTKLKRVFLAENGFTGHIPKSLANLPRLWDLDLRGNSFGGSIPEFQQKDFRMFNLSHNQLEGSIPESLSNKDPSSFAGNKGLCGKPMSPCNEIGGNESRSEIPYPDSSQRKGNKYRILITVIIVIVVVVVASIVALLFIRNHWRKRLQPLILSKQENSKNSVDFRESQSIDVTSDFKKGGDGALNFVREDKGGFDLQDLLRASAVVLGSGSFGSTYKAMILNGPTVVVKRFRHMNNAGKQEFIEHMKRLGSLTHPNLLPLDAFYYRKEDKFLVYDYAENGSLASHLHDRNGSVLNWSTRLKIVKGVARGLAYLYESFPGQNLPHGHLKSSNVVLDHSFEPHLTEYGLVPVMTKSHAQRFMAAYKAPEVNQFGRPNVKSDVWCLGILILELLTGKFPANYLRHGKGGNNSDLATWVDSVVREEWTGEVFDKDIMGTRNGEGEMLKLLRIGMFCCKWSVESRWDWREALAKIEELKEKDSDEEYSSYVSEGDLYSRTMTEDEFSFSVTN* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1088 645 Gene3D Ribonuclease Inhibitor 25 187 IPR032675 -
Gso14g1088 645 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Gso14g1088 645 Gene3D Ribonuclease Inhibitor 188 229 IPR032675 -
Gso14g1088 645 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Gso14g1088 645 Pfam Protein tyrosine and serine/threonine kinase 344 536 IPR001245 GO:0004672|GO:0006468
Gso14g1088 645 Gene3D Transferase(Phosphotransferase) domain 1 415 631 - -
Gso14g1088 645 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 622 - -
Gso14g1088 645 PANTHER LRR RECEPTOR-LIKE KINASE 7 622 - -
Gso14g1088 645 SUPERFAMILY L domain-like 52 208 - -
Gso14g1088 645 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Gso14g1088 645 ProSiteProfiles Protein kinase domain profile. 339 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1088 645 Gene3D Phosphorylase Kinase; domain 1 309 414 - -
Gso14g1088 645 SUPERFAMILY Protein kinase-like (PK-like) 344 612 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1088 Gso-Chr14 19547993 19551651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1088 6 628 Receptor kinase-like Gene Family AT5G35390 46.401 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso14g1088 PK_Tyr_Ser-Thr 8.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1088 - - gmx:100781593 1247.26