Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1045 ATGGATAGAGAAAATGCTGTAATGGGTGGTGTAAGAGAGGGTGAAGAGCGTGGTGTTCGGGTCACTCGAGCAATGGCAAGAGCTGCTTTGGGTTGGGTCTCTGCCTCTTCTAGACCGTCTTTCAAGAAGGAATGTAAAAACAACAGTAGGACAGCACTAGCAGATGTATCTAACATAAGCAGAAAATCACAGGCAAGAGGAGGTTACAAGAAGACTAACACAAAGGGATCTTCCAATGTCTCCATTCAAGTTTTGTCAACTCAAGAAGATGTTAGAGCAGAGTTAGCAAAAGATTTATCCACAATATCGATGGTACAGACACATGATGCTATTGTAGAAAGGCCGGAAGACACAGAGCTAGTGCAACCCTCTATGTCTGTTATGGCAGGTCCTCTGCTTTCAATGCAGAACTCTATGAAGTCTGATGAAATCCTTAGCCCTCCAAACAAAGACATTGATATGATTACTGAGAAACTAAAACTTTCAGAACGTTTGGGCATTGTGGACATTGATTCAGTGGAGTTAAAGGATCCTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAATATATTTGTCAGGGAGTTTGAAAGGAGACCGTTAAGTGATTACATGGACAAGTTACAGCAAGATATCACTCCAAGCATGCGAGGAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTAGTTCCAGATACTCTTTACCTTACTGTGAATCTCATTGATCGGTTTCTTTCTCAAAGTTTGGTTCAGAAACAAAGGCTCCAGTTGCTGGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACGTACACAAAAGCAGAGGTATTGAAAATGGAGAGTGGGGTTCTAAATCTGTTGCATTTTCAGTTATCTGTTCCCACCACAAAAACATTTCTCAGGAGGTTCATCCTAGCAGCACAATCTTCTTACAAGGTTTCTTATGTTGAACTGGAATTTCTGGCAAATTATTTAGCAGAGCTTACTCTTGTTGAATACAGCTTCTTGCAGTTTCTACCTTCCCTTATAGCTGCATCTGCGGTATTAATCGCCAGATGGACTCTCAACCAATCAGAACATCCATGGAATTCAACCATGGAACACTATACAAATTACAAAGTGTCTGAGCTTAAAACTACTGTCCTTGCACTGGCAGATTTGCAACTTGATACGAAAGGCTGTTCCCTGAATGCTATTCGCGAAAAATATAAACAGCAGAAGTTCAAGAGTGTGGCAAATTTGTCTCCGAAACCGGTGCAGTCACTTTTCGAGGCTCAAGTTAAAACTGTAAATGATGCATATGTGAAGACTAAATATTGA 1386 0.4062 MDRENAVMGGVREGEERGVRVTRAMARAALGWVSASSRPSFKKECKNNSRTALADVSNISRKSQARGGYKKTNTKGSSNVSIQVLSTQEDVRAELAKDLSTISMVQTHDAIVERPEDTELVQPSMSVMAGPLLSMQNSMKSDEILSPPNKDIDMITEKLKLSERLGIVDIDSVELKDPQVWSSYAPDIYNNIFVREFERRPLSDYMDKLQQDITPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSQSLVQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMESGVLNLLHFQLSVPTTKTFLRRFILAAQSSYKVSYVELEFLANYLAELTLVEYSFLQFLPSLIAASAVLIARWTLNQSEHPWNSTMEHYTNYKVSELKTTVLALADLQLDTKGCSLNAIREKYKQQKFKSVANLSPKPVQSLFEAQVKTVNDAYVKTKY* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1045 461 CDD CYCLIN 217 302 IPR013763 -
Gso14g1045 461 SUPERFAMILY Cyclin-like 176 313 IPR036915 -
Gso14g1045 461 PANTHER CYCLINS 35 445 IPR039361 -
Gso14g1045 461 PIRSF Cyclin_A_B_D_E 10 451 IPR039361 -
Gso14g1045 461 Pfam Cyclin, N-terminal domain 187 314 IPR006671 -
Gso14g1045 461 Pfam Cyclin, C-terminal domain 316 438 IPR004367 -
Gso14g1045 461 SMART Cyclin_C_2 316 439 IPR004367 -
Gso14g1045 461 SMART cyclin_7 320 408 IPR013763 -
Gso14g1045 461 SMART cyclin_7 223 307 IPR013763 -
Gso14g1045 461 SUPERFAMILY Cyclin-like 315 438 IPR036915 -
Gso14g1045 461 Gene3D - 187 435 - -
Gso14g1045 461 CDD CYCLIN 314 406 IPR013763 -
Gso14g1045 461 ProSitePatterns Cyclins signature. 218 249 IPR006671 -
Gso14g1045 461 Gene3D - 201 314 - -
Gso14g1045 461 PANTHER CYCLIN-A2-4 35 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1045 Gso-Chr14 17589904 17596657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1045 16 445 Core Cell Cycle Gene Families AT5G25380 51.982 1.36e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1045 K06627 - gmx:100777132 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1045 14 17589904 17596657 Gso17g1735 17 33537705 33544796 GST
Gso14g1045 14 17589904 17596657 Gso4g0612 4 5924018 5935265 PCT
Gso14g1045 14 17589904 17596657 Gso6g0610 6 5672315 5678113 PCT
Gso4g0612 4 5924018 5935265 Gso14g1045 14 17589904 17596657 PCT
Gso6g0610 6 5672315 5678113 Gso14g1045 14 17589904 17596657 PCT