Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1038 ATGGAGGGCAGAAACATATCCAGGGTTGATAGTGCAAGAGCCAGTGGTTCTAACATATGGAGGAACAACAACATGGATGTTTTCTCTACATCAGAACGCGAAGATGATGAAGACGCTCTCAAATGGGCAGCCATAGAGCGACTCCCGACGTATCTTCGCATTCAGAGAAGCATACTCAACAATGAAGATGGGAAAGGGAGAGAGGTTGACATCAAGCAACTAGGCCTCACAGAGAGAAAGATTCTTCTGGAGAGGCTTGTGAAGATAGCAGAAGAAGATAATGAAAGGTTCTTGCTGAAACTCAGGGAAAGAATGGACAGAGTTGGGCTTGATATTCCAACAATTGAAGTTAGATTTGAGCATATAAATGTGGAAGCACAAGTTTATGTTGGAGGAAGAGCATTGCCTTCAATGCTGAACTTTTTTGCTAATGTACTAGAGGATCTCTTCTTCTTGCCAAAGGGGTTCTTAAATTATCTTCACATAATTCCAAGTCCAAAGAAACCGTTACGTATACTTCAGAATATCAGTGGAATCATAAAGCCTCGAAGAATGACATTGCTTTTGGGGCCACCCGGTTCTGGAAAGACCACTTTGCTGTTAGCATTGGCTGGAAAACTTGGTAAAGATTTGAAACATTCTGGGAGAGTAACATACAATGGGCATGAGCTTGAAGAGTTTGTGCCACAAAGGACTTCAGCTTATATAAGTCAATATGATAACCACATTGGAGAAATGACTGTGAGAGAAACTCTGGCTTTCTCAGCTAGATGTCAAGGGGTTGGACAAAACTATGAGATTTTGGCTGAGCTACTGAGAAGAGAGAAGCAAGCAAAGATTAAGCCGGATCCTGATATTGATTCCTATATGAAGGCTGCAGCCCTAGGAAGACAGCGGACCAGCGTGGTCACCGATTATATTCTCAAGATTTTGGGACTTGAAGTGTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAGAGAGTCACTACAGGGGAGATGCTGGTTGGACCTATAAAGGTGTTATTCATGGATGAGATATCAACTGGTTTGGACAGTTCCACAACTTTTCAAATAATCAATTCTATCCGGCAATCCATCCATATTCTGAATGGAACTGCACTTGTGTCTCTGCTACAGCCAGCACCAGAAACTTATGAACTATTTGATGATATAATACTATTAACGGATGGCCAAATTGTGTACCAAGGGCCAAGAGAAAATGTGCTAGAGTTTTTCGAATCAATGGGTTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTGCAAGAAGTGACATCAAAAAAGGATCAATGGCAATATTGGGTGCGTAAAGATGAACCTTATAGTTTTGTCACTGTCAAGGATTTTGCTGAAGCATTCCAGTTATTTCACATAGGTCAAAATCTTGGAGAGGAGCTAGCCAGTCCATTTGACAGGTCTAAAAGCCATCCAAATGTATTGACCACAAAGAAGTATGGTGTTAACAAAAAGGAGCTGCTGAGGGCTTGTGCTAGCAGGGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTCAAAGTCACACAACTCATCTATTTAGCTATCATCACAACAACATTATTTCTACGAACTAAGATGCATCGCGATACGGTGGAGGACGGAGGAGCTTACATGGGTGCCCTTTTCTTTGCAGTCACCGTTGCGATGTTCAATGGAATATCAGAGCTAAATATGGCTATCATGAAACTTCCTGTCTTTTACAAGCAAAGGGACCTTCTTTTCTATCCTGCATGGGCTTATTCTCTTCCCCCATGGATTCTCAAAATACCAATTACCCTCATAGAAGTAGCTATTTGGGAAGGCATCTCTTACTATGCCATTGGCTTTGATCCTAGTTTGGTGAGGCTTTTAAAACAGTACCTGATAATCCTTTGCATTAACCAGATGGCATCTTCGCTATTTCGATTGATGGCAGCATTTGGAAGGGATGTTATAGTTGCAAACACTGCTGGAAGTTTTGCATTACTTATAGTTCTGGTTTTGGGAGGATTTGTGATTTCCCGAGAGAATGTGCACAAATGGTTTCTGTGGGGTTACTGGTCCTCACCACTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGTCATAGTTGGAGAAAGGTTACACCTAATTCCAATGAAACACTGGGAGTTTTGATACTGAAAACTCGAGGATTTTTCCCAGAAGCTTATTGGTATTGGATTGGAGTGGGAGCATTAATTGGTTATGTATTTTTGTATAATTTCCTGTTCACCTTGGCATTGCAATATCTAAGTCCATTCAGAAAGGATCAAGCATCAGGGCTATCCCAAGAGAAATTGCTTGAGAGAAATGCTTCAACAGCTGAAGAGTTGATTCAATTACCAAAGGGAAACAGCTCTTCTGAAACAAATATTGTAGAAGAAGCAAACATACCATCCAGATCTTTTTCTGGAAGAATTAGTGATGATAAAGCTAGCGGAAGTGGAAGGAGGGGTATGGTTCTTCCTTTTCAACCTCTATCTCTCACATTTGATGAGATGAAATATTCTGTAGACATGCCACAGGAAATGAAAAAGCAAGGAGTTTTTGAGGAACGTCTAGAACTTTTGAAGGGTGTTAGTGGTGTCTTTAGGCCCGGAGTACTAACAGCTCTGATGGGGGTAAGTGGTGCCGGTAAGACTACATTAATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATACATTGAAGGAAGTATCACAATATCTGGGTACCCAAAGAGGCAAGAAACATTTGCTCGTATCTCAGGATATTGCGAACAATTTGATATCCACTCACCTAATGTTACAGTTTATGAATCTTTATTATATTCTGCATGGCTTCGGTTACCCCGTGAAGTTGATCGTGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTAGTAGAGCTTAACTCAATAAGAGAAGCGCTTGTTGGATTGCCAGGAGAAAATGGACTTTCAACCGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTAGTAGCCAACCCTTCAATAATATTCATGGATGAGCCAACCTCTGGCCTGGATGCTAGAGCAGCTGCAATTGTAATGAGAACCGTGAGGAACACTGTGAACACGGGACGAACCGTGGTTTGCACCATCCACCAGCCAAGTATTGATATATTTGATGCCTTTGATGAGCTGTTACTTTTGAAGTTGGGAGGGGAGCAAATATATGCTGGTCCATTAGGCCGCCACTGTTCCCATCTGATTCAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAAAGAAGGTTATAATCCTGCAACCTGGATGTTGGAAGTTACATCAGCAGGCACAGAAGCATCTATTAAGGTCAACTTCACCAATGTGTACAGAAACTCAGAACTATACGGGAGAAACAAACAATTGATCCAAGAGCTTAGTATACCTCCTCAAGGCTCAAGGGATCTACACTTTGATAGTCAGTATTCACAGACTTTGGTGACACAATGTAAAGCTTGTCTATGGAAACAGCATTTATCATACTGGAGGAACACATCATATACAGCAGTTAGACTCCTATTTACAATGCTAATAGCATTATTATTTGGGATCATATTTTGGGACATTGGCCTGAAAAGGAGTAAAGAGCAAGATCTTTTCAATGCTATGGGTTCAATGTATGCTGCAGTTACCTTCATTGGAGTGCAAAATGGTGCCTCGGTGCAGCCTATAATAGCGGTAGAGAGAACGGTCTTCTACAGAGAGAGAGCGGCTGGAATGTATTCAGCTTTGCCATATGCACTTGCACAGGTTATTATTGAACTTCCCCACATCTTGGTTCAGGCCCTTATGTATGGAATTATCGTATATGCCATGATGGGATTCGATTGGACCACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTATACTACACCTTTTATGGTATGATGACCATGGCCATTACCCCCAACGCACACGTTGCTGCCATATTGTCCAGTGCATTCTATGCAATATGGAGCCTTTTCTCAGGCTTCGTTATTCCCTTGTCTAGAATACCTATATGGTGGAAGTGGTACTATTGGATCTGCCCTGTGGCGTGGACCTTGAATGGATTGGTGGCTTCCCAATATGGAGACAACAGGGACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAAGAGTTATTTTGGGTTTGAACATGATTTTCTAGGGGTAGTGGCATCTGTGGTGGCTGGCTTCTCACTATTGTTTGCTTTCATCTTCGCCTTTGGAATCAAAGTACTCAACTTCCAAAAACGATGA 4365 0.4149 MEGRNISRVDSARASGSNIWRNNNMDVFSTSEREDDEDALKWAAIERLPTYLRIQRSILNNEDGKGREVDIKQLGLTERKILLERLVKIAEEDNERFLLKLRERMDRVGLDIPTIEVRFEHINVEAQVYVGGRALPSMLNFFANVLEDLFFLPKGFLNYLHIIPSPKKPLRILQNISGIIKPRRMTLLLGPPGSGKTTLLLALAGKLGKDLKHSGRVTYNGHELEEFVPQRTSAYISQYDNHIGEMTVRETLAFSARCQGVGQNYEILAELLRREKQAKIKPDPDIDSYMKAAALGRQRTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIKVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSKKDQWQYWVRKDEPYSFVTVKDFAEAFQLFHIGQNLGEELASPFDRSKSHPNVLTTKKYGVNKKELLRACASREFLLMKRNSFVYIFKVTQLIYLAIITTTLFLRTKMHRDTVEDGGAYMGALFFAVTVAMFNGISELNMAIMKLPVFYKQRDLLFYPAWAYSLPPWILKIPITLIEVAIWEGISYYAIGFDPSLVRLLKQYLIILCINQMASSLFRLMAAFGRDVIVANTAGSFALLIVLVLGGFVISRENVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVTPNSNETLGVLILKTRGFFPEAYWYWIGVGALIGYVFLYNFLFTLALQYLSPFRKDQASGLSQEKLLERNASTAEELIQLPKGNSSSETNIVEEANIPSRSFSGRISDDKASGSGRRGMVLPFQPLSLTFDEMKYSVDMPQEMKKQGVFEERLELLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKRQETFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPREVDRATRKMFIEEVMELVELNSIREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGRHCSHLIQYFEAIQGVPKIKEGYNPATWMLEVTSAGTEASIKVNFTNVYRNSELYGRNKQLIQELSIPPQGSRDLHFDSQYSQTLVTQCKACLWKQHLSYWRNTSYTAVRLLFTMLIALLFGIIFWDIGLKRSKEQDLFNAMGSMYAAVTFIGVQNGASVQPIIAVERTVFYRERAAGMYSALPYALAQVIIELPHILVQALMYGIIVYAMMGFDWTTSKFLWYLFFMYFTFLYYTFYGMMTMAITPNAHVAAILSSAFYAIWSLFSGFVIPLSRIPIWWKWYYWICPVAWTLNGLVASQYGDNRDKLENGQRVEEFVKSYFGFEHDFLGVVASVVAGFSLLFAFIFAFGIKVLNFQKR* 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1038 1454 Pfam ABC-2 type transporter 388 439 IPR043926 GO:0140359
Gso14g1038 1454 SMART AAA_5 182 407 IPR003593 -
Gso14g1038 1454 SMART AAA_5 894 1086 IPR003593 -
Gso14g1038 1454 Gene3D - 872 1106 IPR027417 -
Gso14g1038 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 157 430 IPR003439 GO:0005524
Gso14g1038 1454 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 9 1454 - -
Gso14g1038 1454 Gene3D - 160 465 IPR027417 -
Gso14g1038 1454 Pfam ABC-transporter N-terminal 84 141 IPR029481 -
Gso14g1038 1454 Pfam ABC transporter 173 355 IPR003439 GO:0005524
Gso14g1038 1454 Pfam ABC transporter 885 1037 IPR003439 GO:0005524
Gso14g1038 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 1094 IPR027417 -
Gso14g1038 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 430 IPR027417 -
Gso14g1038 1454 Pfam ABC-2 type transporter 1182 1396 IPR013525 GO:0016020|GO:0140359
Gso14g1038 1454 Pfam ABC-2 type transporter 509 721 IPR013525 GO:0016020|GO:0140359
Gso14g1038 1454 Pfam Plant PDR ABC transporter associated 726 787 IPR013581 -
Gso14g1038 1454 CDD ABCG_PDR_domain2 854 1092 IPR034003 -
Gso14g1038 1454 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1454 - -
Gso14g1038 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 857 1109 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1038 Gso-Chr14 16612685 16621522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1038 K08711 - gmx:100815093 2813.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1038 14 16612685 16621522 Gso14g1038 14 16612685 16621522 ECH
Gso14g1038 14 16612685 16621522 Gso17g1747 17 33880658 33891175 GST
Gso4g0601 4 5792786 5800351 Gso14g1038 14 16612685 16621522 PCT
Gso6g0601 6 5538945 5546696 Gso14g1038 14 16612685 16621522 PCT