Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1030 ATGTCATCAAGCCGGCAAAGGAAGACGAAGATGTTTGGGATGTGTGGCGGTGATTATAACGACGACGACAAGGATGATGCAGACAAGAGAGAGATTGATGAAGCAAGAGAAGATGGCAGCCAATATAGTCTCACAGGCATTCTTCTTCCGTCTCTCGGTGCCACGGCTGTCCGCAATGACAGCGGTAGACCAAAGCTTCGCCGATACATTGTCTCACCATATAATCGTCGTTACAAACTATGGAACAAGTTTCTGCTGATATTGGTTTTCTACACTGCTTGGATGTGCCCATTTGAATTTGGTTTCCTTGAGAAATCAATGGGTGCAGTGGCTATAACCGACAATGTTGTAAATGGGTTTTTTGCCATCGACATTGTTCTCACCTTCTTCGTTGCCTACCTTGATAAGTCCACATATTTGCTAGTTGATGACCACAAACTCATTGCTTTGAGATATGCTAAGTCCTGGTTGATCTTGGATGTCATTGCAACCATTCCTTATGAAGTTGTTATTCTAATTTTGCCACCTTCTCTTAAGATATATAGTTACTTCAATATTCTTCGCCTTTGGCGCCTCCATCGAGTGAGTGCCATGTTTGCAAGATTAGAAAAGGACAGGAAATATAGCTACTTTTTGGTGCGCTGTTGCAAGTTTACATGTGTTACTCTATTTTCATTGCATGCTGCTGCATGCTTTTTCTATTTTCTTGCTGCACGGGATAATCCAGAATCTACGTGGCTTGGACTTGTTCCTGATGCCATTGACCAGAATCTTTGGGGAAAGTATGTAGTAGCAATATATTGGTCCATAGTGACCCTTTCATCAGTTGGTTATGGTGATCTACATCCTGTAAACACAAAAGAAATGGTATTTGACATTTTTTATATGCTCTTTAATCTTGGACTCACCTCATATCTGATAGGCAACATGACCAACATGGTAGTCCAGTGGACGGAAAGAACTAAGAGATATAGAGACACTGTACAATCTGCCTCAAATTTCGCTCGTAGGAATCACTTGCCAAATCGTTTACAAGAACAAATGTTTGCTCATTTGCTTATGAAGTACAGAACTGATTTAGAAGGACTACAACATCAAGAGATCATTGATTTCCTTCCAAAAGCCATTCAGTCTAGCATCTCACACTACCTATTCTTTTCAATTGTTGACAAAGTGTACTTATTTCATGGAGTGTCAAATGACCTACTTTTTCAACTGGTCACAGAGATGAAGGCTGAGTATTTTCCTCCGAAGGAAGATGTGATTTTGCAAAATGAAGCACCAACAGACTTTTATATATTCATTACTGGAGCTGCAGATCTTATCATTCATAAGAATGGAATAGAGCAGGTTGTTGGCGAGGCAAAGCCTGGAGATGTAGTTGGGGAAACAGGAGTGTTATGTTATAGGCCACAAGTGTTTACTGTTCGGACCAAGCGGTTGAGCCAGATATTGCGTTTGAATCGAACCACATTTCTAAATCTTGTTCATTCAAATGTTGGAGATGGAACAATGATCATAAACAATTTTCTTCAGAATTTACATGAATCAGAGGATCCATTGATGAAAGGAATCTTGGCAGAAACAGAAGCAATGTTGGCCAGAGGAAAAATGGATTTGCCTATTAGTTTATTGTTTGCAGCTAGCAGAGGTGATGATATGTTGTTGCAACAACTGCTAAAGAAGGGTTCAGATCCAAATGAACCAGATAAGAATGGAAAGACAGCATTGCATATTACAGCTTCCAAAGGCAGAGACCATTGTGTAGCTTTGCTTCTAGAGCATGGGGCTAATCCCAACATCAAAGACTTAGATGGAAATGTCCCACTATGGGAAGCAATCAAGGGTGGGCATGATTCTGTGATGAAACTTCTTATAGACAATGGTGCAGATATATCATCTGGTGATGTAGGTTCTCTTGCATGCGTTGGTGTTGAGCAAAATAACTTAGAATTACTCAAGCATATTGTTCAATGTGGAGGGGACGTGACACAGTCCACGAGCAATGGAACCACAGCACTCCATGCTGCAGTGTGTGAAGGAAATGTTGAAATAGTGAAGTTCCTTCTAGAGCATGGAGCAGACATTGATAAACAAGATGGTAGTGGCTGGACTCCAAGGTTTTTAGCAGATCAACAATGCCACGAAGAAATAATAAATGTATTCAAGAAAGTTGGACACAAGAAAACACCACATGCTATTCCTACAACATCCTTTTTTGAAAGGTATCAAAGTGAACCCACTATACCAGGCATTCCCCAGGGAAGCAAGCCACCTAATGAAGAACCAACATGGTTTGATAATCATCAAAGAAGAAGAGTTAGCCCTTTCCATAATTCCTTTTTTGGGATAATGTCAAATGCAAATTATGATAAAAAAGACTCCACAACCGCATCTCAAAGTAGTCACATTAGTAGGGAAGAATTACTAGCCAGAGTAACTCTTAGTTGTCCAAAGAAAGGTGAACATGCCAAAAAGCTTATTTTTCTGCCAAAATCCCTTGAAGAATTGCTACATATTGGTGCTGAAAAGTTTGATTACTCTGCCACCAGAATATTAAGCAAAGAAGGAGCTGAAATTGAAGACATATATGTTATAAGAGATGGTGATCTTCTTATTCTTGCATAG 2628 0.3992 MSSSRQRKTKMFGMCGGDYNDDDKDDADKREIDEAREDGSQYSLTGILLPSLGATAVRNDSGRPKLRRYIVSPYNRRYKLWNKFLLILVFYTAWMCPFEFGFLEKSMGAVAITDNVVNGFFAIDIVLTFFVAYLDKSTYLLVDDHKLIALRYAKSWLILDVIATIPYEVVILILPPSLKIYSYFNILRLWRLHRVSAMFARLEKDRKYSYFLVRCCKFTCVTLFSLHAAACFFYFLAARDNPESTWLGLVPDAIDQNLWGKYVVAIYWSIVTLSSVGYGDLHPVNTKEMVFDIFYMLFNLGLTSYLIGNMTNMVVQWTERTKRYRDTVQSASNFARRNHLPNRLQEQMFAHLLMKYRTDLEGLQHQEIIDFLPKAIQSSISHYLFFSIVDKVYLFHGVSNDLLFQLVTEMKAEYFPPKEDVILQNEAPTDFYIFITGAADLIIHKNGIEQVVGEAKPGDVVGETGVLCYRPQVFTVRTKRLSQILRLNRTTFLNLVHSNVGDGTMIINNFLQNLHESEDPLMKGILAETEAMLARGKMDLPISLLFAASRGDDMLLQQLLKKGSDPNEPDKNGKTALHITASKGRDHCVALLLEHGANPNIKDLDGNVPLWEAIKGGHDSVMKLLIDNGADISSGDVGSLACVGVEQNNLELLKHIVQCGGDVTQSTSNGTTALHAAVCEGNVEIVKFLLEHGADIDKQDGSGWTPRFLADQQCHEEIINVFKKVGHKKTPHAIPTTSFFERYQSEPTIPGIPQGSKPPNEEPTWFDNHQRRRVSPFHNSFFGIMSNANYDKKDSTTASQSSHISREELLARVTLSCPKKGEHAKKLIFLPKSLEELLHIGAEKFDYSATRILSKEGAEIEDIYVIRDGDLLILA* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1030 875 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 11 875 - -
Gso14g1030 875 Pfam Ankyrin repeats (3 copies) 645 722 IPR002110 GO:0005515
Gso14g1030 875 Pfam Ankyrin repeats (3 copies) 544 634 IPR002110 GO:0005515
Gso14g1030 875 ProSiteProfiles Ankyrin repeat region circular profile. 669 700 - -
Gso14g1030 875 Pfam KHA, dimerisation domain of potassium ion channel 812 874 IPR021789 -
Gso14g1030 875 Gene3D Jelly Rolls 360 519 IPR014710 -
Gso14g1030 875 ProSiteProfiles Ankyrin repeat region circular profile. 572 603 - -
Gso14g1030 875 Gene3D - 541 724 IPR036770 -
Gso14g1030 875 SUPERFAMILY cAMP-binding domain-like 319 514 IPR018490 -
Gso14g1030 875 CDD CAP_ED 394 499 IPR000595 -
Gso14g1030 875 ProSiteProfiles Ankyrin repeat region circular profile. 605 636 - -
Gso14g1030 875 Gene3D - 81 316 - -
Gso14g1030 875 ProSiteProfiles KHA domain profile. 812 875 IPR021789 -
Gso14g1030 875 MobiDBLite consensus disorder prediction 1 35 - -
Gso14g1030 875 PANTHER POTASSIUM CHANNEL AKT1 11 875 IPR045319 GO:0005249|GO:0006813
Gso14g1030 875 SMART cnmp_10 394 511 IPR000595 -
Gso14g1030 875 PRINTS Ankyrin repeat signature 573 588 IPR002110 GO:0005515
Gso14g1030 875 PRINTS Ankyrin repeat signature 685 699 IPR002110 GO:0005515
Gso14g1030 875 SMART ANK_2a 572 601 IPR002110 GO:0005515
Gso14g1030 875 SMART ANK_2a 833 862 IPR002110 GO:0005515
Gso14g1030 875 SMART ANK_2a 605 634 IPR002110 GO:0005515
Gso14g1030 875 SMART ANK_2a 539 568 IPR002110 GO:0005515
Gso14g1030 875 SMART ANK_2a 669 698 IPR002110 GO:0005515
Gso14g1030 875 SMART ANK_2a 636 665 IPR002110 GO:0005515
Gso14g1030 875 Pfam Cyclic nucleotide-binding domain 414 499 IPR000595 -
Gso14g1030 875 ProSiteProfiles Ankyrin repeat profile. 572 604 IPR002110 GO:0005515
Gso14g1030 875 MobiDBLite consensus disorder prediction 17 35 - -
Gso14g1030 875 SUPERFAMILY Ankyrin repeat 543 726 IPR036770 -
Gso14g1030 875 PRINTS EAG/ELK/ERG potassium channel family signature 91 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso14g1030 875 PRINTS EAG/ELK/ERG potassium channel family signature 114 124 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso14g1030 875 PRINTS EAG/ELK/ERG potassium channel family signature 125 134 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso14g1030 875 PRINTS EAG/ELK/ERG potassium channel family signature 262 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso14g1030 875 PRINTS EAG/ELK/ERG potassium channel family signature 288 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso14g1030 875 PRINTS EAG/ELK/ERG potassium channel family signature 306 315 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso14g1030 875 Pfam Ion transport protein 79 321 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso14g1030 875 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Gso14g1030 875 SUPERFAMILY Voltage-gated potassium channels 73 316 - -
Gso14g1030 875 ProSiteProfiles Ankyrin repeat profile. 669 701 IPR002110 GO:0005515
Gso14g1030 875 ProSiteProfiles cAMP/cGMP binding motif profile. 394 513 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1030 Gso-Chr14 16323930 16338380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1030 26 875 Ion Channels AT2G25600 57.614 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1030 K21867 - gmx:100808832 1744.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1030 14 16323930 16338380 Gso14g1030 14 16323930 16338380 ECH
Gso14g1030 14 16323930 16338380 Gso17g1763 17 34327212 34334891 GST
Gso14g1030 14 16323930 16338380 Gso4g0597 4 5754433 5760986 PCT
Gso14g1030 14 16323930 16338380 Gso6g0595 6 5493912 5499868 PCT
Gso4g0597 4 5754433 5760986 Gso14g1030 14 16323930 16338380 PCT
Gso6g0595 6 5493912 5499868 Gso14g1030 14 16323930 16338380 PCT