Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1018 ATGTACAGGAGAAAAGGGTGTTGGTCCAAATACCAGAAAATCACTACACTACAAGGGTTCTTTCTTTCATCGAATAAAAGGCTCCTTTGCCCAGGGACTGGAGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAGTCACCTAGGCTAAAGCATGATGGTCCAGGCCTTCTATCAATGGCAGTTGCTGATCGTGACATGCTTGGTTCTCATTTTACCCTCACTTTTAAAGCTGACCCCCATCTTGATAGGAAACATGTAGTCTTTGGCAAGCTTGTGCAAGGGCATGATGTATTGAAGAAAATTGAAGAAGTGGGTGATGAAGAAGGACTTCCAAGTGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGGAAAGAAGATAAATAAATCAAAAAAGGTAAGAGATGGATCTTCCAAAACCAATAGTCATGAAGTGCCGCATAAGGGAAAGCACAAAAAATCTAGAGCAGACAGAAGGAGAAAATACTACTCATCAGAATCTGATAGTTCCTCAGATTTAGACATGGAATCTTCAGAAAGTAATAGTGATTCTGACTCAGATGTATCTTCATCATCTTACACAAGTTCCTCCAGCGATGACAGGCGGAGAAAGAGAAAAAGGTCTAGGAAAAATAAACTTAGACGTGGAAAAAGAAGAGACAAACACAGAGACAAGAGACAAAGGAAACAAGACAAAAGATCAAAGCTTAGATCAAGAAGGGAATTGGCCAGTCATACCAATTCAGATAGTGGAAGTAGGAGTGACAACAACTCTGATGGCAAAAGTGGTGCTGCTCAAGCGAAAGATAAGAAGCATAAAGGTCATTCTCAGAGACATGCTGAAGGTCAACCTTCCGTAGTTGCGGAGAAAGAGTTACATCACATGCACCTTGAAAAGAGGGAGAAACCGAATATGCTAGAGGAGGAAGAATTCCCAAAGGAAAATGGAGAGTGGCATAGCAACAGCACTGGGGCTAACCATAGATCTGACAGAAGGGAAGGGAGGCAGCCTGATGTGATGGATGATCAACTAGGCAAATCTAGGAATCAAAGCAGGAGCCCCAAGCGAACCATGAGTATGAGTATTAGTCCAAGGAGTGACAGAAAAAGCCCAAGCATTGATCCAAAAAGGAGGTTGAGCAGAAGTCCAGGTGGTAGTAGAAGCCCTCATGCTCCATTATGGAGGAGTTTGAGCAGGAGTCCAAACAGAAGAAGCATTAAAAGAAGCCCAGTGAGAGGTAGGAAGGGAAGAAGTGTTAGTAGAAGCCCCGTGAGCACTCACAATCATGGAAGTATCAGTAGAAGCCCTGTGAGATCTCGTGATCATAGAAGTGGCAGTGCAAGCTCTGTAAAATCCCTTTCTCAGGGCCGTCGAAGGAGTTTACCCAGAGCACCTTCGCGAAGATCAATCAGCAGAAGTCCCGTGAAATCACATGGTCATAGAATTCTCAGTAGAAGCCCTGTGAGATCACGTGGTCATAGAAGTGTCAGTGCTAGCCCTGTAGGATCCCTTTCTCGTAGCCACCGAAGTTCACCCAGAGCACCATCACAAAGATCAATCAGCAGAAGCCCTGTGAGAACTCAGAATCATAGAAGTGTCAGTAGAAGTCCTGTGAGATCTTGTGATCATAGAATTGTCAGTGCAAGTCCTGTAAGATCCCTTTCTCGTAGCTGCCAGAGGAGTTCACCCAGAGAACCATCATGTAGATCAATAAGCAGAAGCCCTGTGAGAACTTGCAGTGATAAAAGTGTCAGTAGAAGTCCTATGGGATCTCATGGTAATAGAAATGGCAGTGCAAGCCCTGTAAGATCCCTTTATCTGAGTCATCGTAGGAGTTCACCAAGAGCACCATCAGGAAGATCAATTAGCAGAAGCCCTGTAAGAGTGTCAAGAAAGAGTATAAGCAGGAATCCAGTTAGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGTAGAGTCCCTTTGAGAAGCATTAGCCGAAGTTCAGTTAGAGCACCAAGCAGAGTCAATCGCCGCAGTTATTCTAGGAGTCGTAGCCCTGTTTGTAGGGCAAGGACTCCTCGTGGTAGGAGCTTGTCTAGAAGTGTGTCACCTGATGTTTCTCCGAAACGTATCAGAAGGGGAAGAGGTTTCAATGAACGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCAGTCTCCCCCTATGAGATCATACCGCTATAGTGGCTATAGTGGACGAAGTGACCGTGACAGATATTCAAGTTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACTGCCATGCAGAAGAACTCCACCGAGGTTCCGAAGTAGGAGGAGCAGGACACCCTTTATATCACGCAGCCCACGTTACTGA 2376 0.4487 MYRRKGCWSKYQKITTLQGFFLSSNKRLLCPGTGGESIYGSKFPDESPRLKHDGPGLLSMAVADRDMLGSHFTLTFKADPHLDRKHVVFGKLVQGHDVLKKIEEVGDEEGLPSVTVKIINCGEHNEDGKKINKSKKVRDGSSKTNSHEVPHKGKHKKSRADRRRKYYSSESDSSSDLDMESSESNSDSDSDVSSSSYTSSSSDDRRRKRKRSRKNKLRRGKRRDKHRDKRQRKQDKRSKLRSRRELASHTNSDSGSRSDNNSDGKSGAAQAKDKKHKGHSQRHAEGQPSVVAEKELHHMHLEKREKPNMLEEEEFPKENGEWHSNSTGANHRSDRREGRQPDVMDDQLGKSRNQSRSPKRTMSMSISPRSDRKSPSIDPKRRLSRSPGGSRSPHAPLWRSLSRSPNRRSIKRSPVRGRKGRSVSRSPVSTHNHGSISRSPVRSRDHRSGSASSVKSLSQGRRRSLPRAPSRRSISRSPVKSHGHRILSRSPVRSRGHRSVSASPVGSLSRSHRSSPRAPSQRSISRSPVRTQNHRSVSRSPVRSCDHRIVSASPVRSLSRSCQRSSPREPSCRSISRSPVRTCSDKSVSRSPMGSHGNRNGSASPVRSLYLSHRRSSPRAPSGRSISRSPVRVSRKSISRNPVRSSARSLSRSSGRVPLRSISRSSVRAPSRVNRRSYSRSRSPVCRARTPRGRSLSRSVSPDVSPKRIRRGRGFNERYSYARRYRTPSQSPPMRSYRYSGYSGRSDRDRYSSYRRYSPRRNRSPLPCRRTPPRFRSRRSRTPFISRSPRY* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1018 791 MobiDBLite consensus disorder prediction 172 200 - -
Gso14g1018 791 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 32 434 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 268 320 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 554 611 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 423 437 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 328 346 - -
Gso14g1018 791 Coils Coil 223 243 - -
Gso14g1018 791 Gene3D - 11 125 IPR029000 -
Gso14g1018 791 MobiDBLite consensus disorder prediction 704 720 - -
Gso14g1018 791 SUPERFAMILY Cyclophilin-like 27 125 IPR029000 -
Gso14g1018 791 MobiDBLite consensus disorder prediction 206 239 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 251 267 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 618 684 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 405 419 - -
Gso14g1018 791 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 122 IPR002130 GO:0000413|GO:0003755
Gso14g1018 791 MobiDBLite consensus disorder prediction 125 148 - -
Gso14g1018 791 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 17 123 IPR002130 GO:0000413|GO:0003755
Gso14g1018 791 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 32 434 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 347 372 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 723 737 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 477 492 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 742 756 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 125 791 - -
Gso14g1018 791 MobiDBLite consensus disorder prediction 494 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1018 Gso-Chr14 15930098 15937614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1018 32 119 U-box Gene Family AT5G67530 43.333 4.67e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1018 K09566 - gmx:100801588 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1018 14 15930098 15937614 Gso14g1018 14 15930098 15937614 ECH