Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1005 ATGGGAAAACAGTGGTCTCTCTTCAGTGTTATGGATACCCTCTTGTTGTGTCTCCTTCTTTCTTCTGAAGTTGTTCTGACAAGTTTTCTAAATGTTGGCAAAGTCTATCCGAGAATTGAAGGTTCTCAAATGAATTGGATTGACAGGGATGGCATTTTGCTTGTGTCAAATAAAGGAGAATTTGGCTTTGGCTTGGTCACCACTGCAAATGATTCTACATTGTTTCTACTAGCAATAGTCCACAAGTACTCCAACAAGGTGGTTTGGGTTGCAAATAGGGCACTTCCTGTTTCCAATTCTGATAAATTTGTGTTTGATGAGAAGGGCAATGTCATTTTGCATAAAGGAGAAAGTGTGGTGTGGTCTTCAGATACAAGTGGCAAGGGTGTTTCTTCAATGGAATTGAAGGACACTGGAAACTTGGTTTTGCTAGGGAATGATAGTAGAGTGATTTGGCAGAGTTTCAGGCACCCTACAGATACCTTGTTGCCAATGCAAGATTTCAATGAGGGAATGAAACTTGTCAGTGAACCTGGTCCTAACAACTTGACCTATGTTCTTGAGATTGAATCCGGCAATGTCATTCTCTCCACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGAAGAAGGATAGCCGCAAAAAAATCATCAACAAAAATGGTGATGTGGTGACTTCAGCTACCCTTAATGCAAACTCCTGGAGGTTCTATGATGAGACTAAATCCATGTTGTGGGAATTGGATTTTGCTGAAGAATCAGATGCAAATGCCACTTGGATTGCAGGTTTGGGAAGTGATGGCTTCATCACTTTCTCCAATCTTCTAAGTGGAGGGTCAATTGTTGCTTCATCAACTAGAATACCACAAGATTCTTGCAGCACCCCAGAATCATGTGATCCCTATAACATATGCAGTGGTGATAAAAAGTGTACCTGCCCTTCTGTTCTTAGCTCTAGGCCTAATTGCCAACCTGGAAATGTCTCTCCTTGCAACTCAAAAAGCACCACTGAACTTGTCAAAGTTGATGATGGACTCAATTACTTTGCACTTGGGTTTGTTCCACCATCTTCAAAGACTGATTTGATTGGTTGCAAAACCTCTTGCAGTGCAAATTGCTCATGCCTTGCAATGTTCTTCAACAGCAGTTCAGGGAACTGTTTCCTGTTGGACAGGATTGGAAGCTTTGAGAAATCTGACAAAGATTCTGGTTTAGTGTCCTATATTAAGGTGGTATCTAGTGAAGGTGACATTAGAGACAGTAGCAAAATGCAGATAATAGTTGTTGTGATCATTGTCATATTCACATTGTTTGTCATCTCTGGTATGCTCTTTGTGGCACATAGATGCTTCAGGAAAAAGCAAGATTTGCCGGAGTCTCCTCAAGAGGATTTGGAAGATGACAGTTTCTTGGAGAGTCTAACCGGCATGCCAATCCGTTACAGCTACAATGATCTAGAAACTGCAACAAGTAACTTCTCTGTGAAGCTAGGAGAAGGGGGGTTTGGCTCAGTTTACAAAGGAGTTCTACCAGATGGGACTCAACTAGCTGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAGTTCTGGGTCGAAGTAAGCATTATAGGGAGCATTCATCACCACCATTTGGTAAGGCTTAAAGGGTTCTGTGCTGAAGGGTCTCATAGACTTCTTGCTTATGAGTACATGGCCAATGGTTCATTGGATAAATGGATATTCAACAAGAACATAGAGGAATTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTACCTCCATGAAGATTGTGACTCGAAGATTATTCATTGTGACATCAAACCAGAAAATGTACTCCTGGATGATAATTTTATGGTCAAGGTTTCTGATTTTGGTTTGGCTAAGCTCATGACACGCGAACAAAGCCATGTTTTCACAACACTAAGAGGCACTAGAGGCTACCTTGCACCTGAGTGGATCACAAACTGTGCCATATCAGAGAAAAGTGATGTTTATAGCTATGGCATGGTGTTGCTAGAGATCATTGGGGCGAGGAAAAACTATGATCCCAGTGAAACTTCAGAGAAATCCCATTTCCCATCTTTTGCTTTTAGGATGATGGAAGAAGGGAATCTGAGAGAGATTCTTGACTCAAAGGTGGAAACTTATGAAAATGATGAAAGGGTTCACATTGCTGTGAAAGTTGCATTGTGGTGCATACAGGAAGACATGTCTCTTAGGCCTTCCATGACCAAAGTGGTCCAAATGCTAGAGGGTTTATGCATTGTTCATAAGCCAGCAATTTGCTCTGTCCTTGGTTCTCGGTTTTACTCAACTAGTGAGGTTGGCACTTCTTCAGGACCATCAGATTGTAACAGTGAAGCCAATCTCTCTGCTGTTAGGCTTTCAGGGCCAAGATAA 2433 0.4168 MGKQWSLFSVMDTLLLCLLLSSEVVLTSFLNVGKVYPRIEGSQMNWIDRDGILLVSNKGEFGFGLVTTANDSTLFLLAIVHKYSNKVVWVANRALPVSNSDKFVFDEKGNVILHKGESVVWSSDTSGKGVSSMELKDTGNLVLLGNDSRVIWQSFRHPTDTLLPMQDFNEGMKLVSEPGPNNLTYVLEIESGNVILSTGLQTPQPYWSMKKDSRKKIINKNGDVVTSATLNANSWRFYDETKSMLWELDFAEESDANATWIAGLGSDGFITFSNLLSGGSIVASSTRIPQDSCSTPESCDPYNICSGDKKCTCPSVLSSRPNCQPGNVSPCNSKSTTELVKVDDGLNYFALGFVPPSSKTDLIGCKTSCSANCSCLAMFFNSSSGNCFLLDRIGSFEKSDKDSGLVSYIKVVSSEGDIRDSSKMQIIVVVIIVIFTLFVISGMLFVAHRCFRKKQDLPESPQEDLEDDSFLESLTGMPIRYSYNDLETATSNFSVKLGEGGFGSVYKGVLPDGTQLAVKKLEGIGQGKKEFWVEVSIIGSIHHHHLVRLKGFCAEGSHRLLAYEYMANGSLDKWIFNKNIEEFVLDWDTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDNFMVKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNCAISEKSDVYSYGMVLLEIIGARKNYDPSETSEKSHFPSFAFRMMEEGNLREILDSKVETYENDERVHIAVKVALWCIQEDMSLRPSMTKVVQMLEGLCIVHKPAICSVLGSRFYSTSEVGTSSGPSDCNSEANLSAVRLSGPR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1005 810 ProSiteProfiles Protein kinase domain profile. 491 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1005 810 CDD B_lectin 47 158 IPR001480 -
Gso14g1005 810 PIRSF SRK 8 808 IPR024171 GO:0004674
Gso14g1005 810 SMART serkin_6 491 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1005 810 SMART blect_4 45 158 IPR001480 -
Gso14g1005 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Gso14g1005 810 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1005 810 Gene3D Phosphorylase Kinase; domain 1 460 565 - -
Gso14g1005 810 Gene3D Transferase(Phosphotransferase) domain 1 566 770 - -
Gso14g1005 810 ProSiteProfiles Bulb-type lectin domain profile. 38 156 IPR001480 -
Gso14g1005 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 209 IPR036426 -
Gso14g1005 810 CDD STKc_IRAK 497 764 - -
Gso14g1005 810 Gene3D - 47 155 IPR036426 -
Gso14g1005 810 Pfam D-mannose binding lectin 87 168 IPR001480 -
Gso14g1005 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 810 - -
Gso14g1005 810 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Gso14g1005 810 SUPERFAMILY Protein kinase-like (PK-like) 470 762 IPR011009 -
Gso14g1005 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1005 Gso-Chr14 14557441 14560868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1005 469 770 Receptor kinase-like Gene Family AT5G20050 47.634 5.68e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso14g1005 Pkinase 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1005 - - gmx:100787985 1613.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1005 14 14557441 14560868 Gso14g1005 14 14557441 14560868 ECH
Gso14g1005 14 14557441 14560868 Gso17g1793 17 35139491 35142962 GST
Gso14g1005 14 14557441 14560868 Gso4g0571 4 5536356 5539467 PCT
Gso14g1005 14 14557441 14560868 Gso6g0568 6 5270751 5274063 PCT
Gso4g0571 4 5536356 5539467 Gso14g1005 14 14557441 14560868 PCT
Gso6g0568 6 5270751 5274063 Gso14g1005 14 14557441 14560868 PCT