Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1000 ATGAATATTATACTTTCAGAGTCAAGAATGTCTAAAGAAGTTATTGCTACTCAATCACCTACTCCTTTTGAGTATGAGATCTTGGATAGTGATGCTGAAGTCCTTAGAACTGTTAGAGCCTCATCCAATTGTGCTAATCCATGGATTGAACCTGAAAGGTTGAAACTTAGACATAGAATTGGCCGAGGCCCCTTTGGTGATGTCTGGCTAGCAACTCATCATCAGTCAACTGAAGATTTTGATGAGTACCATGAAGTTGCTGCTAAGATGTTGCATCCAATCAGAGAGGATCATGTGAAGATTGTATTAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCGTTTCCTGGCTACATGGAATTTCAGTCTTAAATGGGAGGATATGCATCATTATGAATTTGTGTGAGGGTTCAATTGGTGACAAGATGGCAGGACTCAAAGAAGGAAGGATTTCATTGAATGATGTCTTAAGGTATGGAATCAATCTAGCTCAAGGTGTTCAGGAACTTCACTCTAAAGGCAGCTTCATCCTGAACCTTAAACCTTTTAATGTTCTTCTCAATGATAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCTAGCCTTTTGCTTGGCTCATCATTCCTGAGCTCAGACATGGCTAAGAGGCTTGGAACTCCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCCTTTGAAACAGATTCTTGGGGATTTGGGTGCACCATTGTCGAAATGTTGACTGGTAACCAACCTTGGTATGGATGTCCTGTTCGCAGAATATACCAGTCAGTTGTTGAAAAACATGAAAAACCAAATATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATATCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCGTTAATGGTAGATATTCTGAGTGTCTTTCAAAGTGCGCTGAATGAACTAGTCAATGATGGAGAATGGAGATATCAAGGAAATGTGAAAGTTATTCCAAAATCAGTAAGCACTGGCTACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGCGACATGGTCCGATCTAGAAAGCCTTCCAATTCACGCAGACCCCAAAACATGGGCATCCCAGAAGGAACTGTTGTTGGTTTAGAGCGAAATGCAGATCACGGGTTCGCCCTTGTGAGGGTCCACGGCATTCATGACCCTTTTAGAATTCATATGTCAACTCTTGAACGTGTCACATTTGGCTTGGCAGCTGGTGATTGGGTACGCCTGAGGGATGAAAATGAGAAGCACTCACCAGTGGGCATTCTACACGCCGTCAATCGCAACGGTAGAGTGGCTGTCGGATTTCTCGGTCTGCAAACTCTGTGGAACGGAAACTCTTCTGAACTCGAAATGGTGGAATCGTACTGCATTGGCCAGTTTGTCAGGCTCAAAGACAACCTTTCAAGTCCTCGATTCGAATGGCGTCGCAAAAGGGGAGGTGCCTCGGCTACTGGCAGGATTTCATGGATTCTACCAAATGGATGCTTGGTTGTCAAGTTCCCAGGAATGCTCCCTTTCGGCAATGAACCAAGCACCTGCTTGGCCGATTCCTCCGAGGTTGAAGTGGTTGAGTTCAAGACATGTCCTGGGATGATAGAGAAGTATCAACATGTAGAGGATCATCACTGGGCAATTAGACCTGTTGTAATTGCAATTGGTCTATTCAGTATTCTCAAACTAGGCATATCAGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTCACTTCAATAGAAAGTGAATATCTTGATGGTCAAAACCAAAATGCTGCCACCTCTTCTACAACTACAACTACAAGGAGATCTTCGAATTCAAGTGCTACAATACCAGTTAGCACAATGTGGGTTCCTGCAGTTGCTAATATGATTTTTAAGGAAGGTGTTACCTCGTCCAATGGTCGGTAG 1965 0.4331 MNIILSESRMSKEVIATQSPTPFEYEILDSDAEVLRTVRASSNCANPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDFDEYHEVAAKMLHPIREDHVKIVLEKFNELYFKCQGVASVSWLHGISVLNGRICIIMNLCEGSIGDKMAGLKEGRISLNDVLRYGINLAQGVQELHSKGSFILNLKPFNVLLNDNDQAILGDVGIPSLLLGSSFLSSDMAKRLGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVRRIYQSVVEKHEKPNIPSGLPSSVENILSGCFEYDLRNRPLMVDILSVFQSALNELVNDGEWRYQGNVKVIPKSVSTGYTEWFLSKDHLQVGDMVRSRKPSNSRRPQNMGIPEGTVVGLERNADHGFALVRVHGIHDPFRIHMSTLERVTFGLAAGDWVRLRDENEKHSPVGILHAVNRNGRVAVGFLGLQTLWNGNSSELEMVESYCIGQFVRLKDNLSSPRFEWRRKRGGASATGRISWILPNGCLVVKFPGMLPFGNEPSTCLADSSEVEVVEFKTCPGMIEKYQHVEDHHWAIRPVVIAIGLFSILKLGISVGKKVRRNNKVTSIESEYLDGQNQNAATSSTTTTTRRSSNSSATIPVSTMWVPAVANMIFKEGVTSSNGR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1000 654 SUPERFAMILY Protein kinase-like (PK-like) 51 319 IPR011009 -
Gso14g1000 654 Gene3D Transferase(Phosphotransferase) domain 1 140 347 - -
Gso14g1000 654 PANTHER OS06G0639500 PROTEIN 10 651 - -
Gso14g1000 654 Pfam Protein tyrosine and serine/threonine kinase 54 316 IPR001245 GO:0004672|GO:0006468
Gso14g1000 654 Gene3D Phosphorylase Kinase; domain 1 24 139 - -
Gso14g1000 654 ProSiteProfiles Protein kinase domain profile. 54 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1000 654 MobiDBLite consensus disorder prediction 606 627 - -
Gso14g1000 654 PANTHER OS06G0639500 PROTEIN 10 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1000 Gso-Chr14 14421248 14427151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1000 38 325 MAP Kinase Kinase Kinase AT2G17700 24.315 1.65e-19 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Gso14g1000 PK_Tyr_Ser-Thr 3.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1000 - - gsj:114393396 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1000 14 14421248 14427151 Gso14g1000 14 14421248 14427151 ECH
Gso14g1000 14 14421248 14427151 Gso17g1797 17 35195574 35202809 GST
Gso14g1000 14 14421248 14427151 Gso4g0564 4 5468282 5472618 PCT
Gso14g1000 14 14421248 14427151 Gso6g0560 6 5201376 5205816 PCT
Gso4g0564 4 5468282 5472618 Gso14g1000 14 14421248 14427151 PCT
Gso6g0560 6 5201376 5205816 Gso14g1000 14 14421248 14427151 PCT