Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0996 ATGTTTGTCCTAGAAAATGGTGCGAAGAAGAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGCTGTTGGATCACAGCGCGTTTAAAGACGTGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGCGCTGTCCAACACAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGGTGGAACTCTGTCAGCAGCAATTATACTTCTAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGGTACGCAGCAAACTTAATGGAAAGCCACTTTATATCCTTGTGGAGCCACGTCAAGTAGAAAATGGTTTTTGA 492 0.4268 MFVLENGAKKKGEDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHSAFKDVVDIFVDRYRDMDISVVAGEVISEKYVLEYGTDCLEMHVGAVQHNERVIIIDDLVATGGTLSAAIILLERADAEVVECACVIGLSDLKVRSKLNGKPLYILVEPRQVENGF* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0996 163 SUPERFAMILY PRTase-like 23 149 IPR029057 -
Gso14g0996 163 Pfam Phosphoribosyl transferase domain 60 134 IPR000836 -
Gso14g0996 163 Gene3D - 7 70 IPR029057 -
Gso14g0996 163 CDD PRTases_typeI 87 155 IPR000836 -
Gso14g0996 163 Gene3D - 71 161 IPR029057 -
Gso14g0996 163 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 70 160 - -
Gso14g0996 163 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 13 71 - -
Gso14g0996 163 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 13 71 - -
Gso14g0996 163 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 70 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0996 Gso-Chr14 14179120 14183156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0996 13 155 PRT Gene Family AT1G27450 54.023 1.24e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0996 K00759 - gmx:100818276 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0996 14 14179120 14183156 Gso14g0996 14 14179120 14183156 ECH
Gso14g0996 14 14179120 14183156 Gso17g1800 17 35271943 35275327 GST
Gso14g0996 14 14179120 14183156 Gso4g0563 4 5446965 5452073 PCT
Gso14g0996 14 14179120 14183156 Gso6g0559 6 5180805 5185686 PCT
Gso4g0563 4 5446965 5452073 Gso14g0996 14 14179120 14183156 PCT
Gso6g0559 6 5180805 5185686 Gso14g0996 14 14179120 14183156 PCT