Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0983 ATGGGGAAGCCGACAGGGAAAAAGAAAGATCCTTCGACTCCTCCGAAGGCGAACGGCCACCACCACAACCCGTCGAAATCCTTGGATGACAGCAACAACAACAAACGCGCGGCGGCGCTGGACGACGACACGGCGATGTTCATAAACATGTCGCAGGAGCTTCGCGAGGAAGGGAATAGGCTCTTCCAGAAGAAAGACCACGAGGGGGCCATGTTAAAGTACGAAAAAGCCCTCAAGCTATTACCGAAGAGCCACATTGACGTGGCGCATCTCCACACCAGCATGGCCATGTGCTACATGCAGCTGGGCCTCGGCGAGTACCCGCGTGCCATCAACGAGTGCAACATGGCGCTGCAGGTCTCGCCGAGGTACACCAAAGCGCTTCTAAAGCGCGCAAAGTGCTACGAGGCGCTGAACCGCGTCGATTTGGCGATGCGGGACGTGCGCGTGGTTTTAAACTTGGAGCCTAACAATTCGACGGCGCTGGAGGTTTTGGATAGTTTGAGGATGACGATGGAGGAGAAGGGGATTGTCGTCGATGAGACGGAGATCGCCCTTGCCGCACTGCAGCACCAGCCGGAGCCGGCCTCCGCGCGGCTGAGGAAGATTGTGAGGGAGAAGATTAAGAAGAAGAAGGAACACAAGGGTGGAGAGGATGGAGGGAAAGCGAAAAAGATTATAATTGAGGAGAAGGTTAAGGTTGAGAATGTTAAAAAGAAGGATAATAAGGACAAGGATCACAAGGTTCATAAGGATAAGGAGAAGAGGGTGGTGAAGGAAGAGAAAGAGAAATTGGGGAAGGAGGAGAAAGAGAAAGATAAAGGGGTTGTTACTAGGACTGTGAAGTTGATATATGGAGAGGATATTAGATGGGCACAATTGCCTGTGAATTGTGGGATGAGGTTGGTGAGGGATGTGATAAGAGATAGGTTTCCTGGGTTGAAGGGTGTTCTTGTGAAGTATAGGGATAGGGAGGGTGATTTGGTTACTATCACTAGTACTGCTGAATTGAGGTTGGCCGAGACTTGTCATGTGCTTGGATCTATTCGGCTTTATGTTACGGAGATTGAGCCGGATCAGGAGCTATGTTATGATGATGGTGTGGCGGGGGTGGAGGATGGTGGGAGGATGAGGATGAAGGTGGTTGAGAATGGGGGTGGGGATGGAGGGAAGGGTGTGGGGAAAGGGGTGAGTACTGTGGAGGATTGGCTTGTGCAGTTTGCGAGGCTGTTTAAGAATCATGTTGGGTTTGATTCGGATGCGTATTTGGATATTCATGGGATTGGGATGAAGCTGTATTCGGAGGCGATGGAGGATGCGGTGACGAGTGAGGGTGCTCAGGAGCTGTTTGACATTGCGGCGGATAGGTTTCAGGAGATGGCGGCTTTGGCATTGTTTAATTGGGGGAGTGTGCACATGTCAAGGGCGAGGAAGCGGGTGAGTATTCCAGAGGATGGGTCGAGGGAGTCTGAGTTTGAATTTGTTAAGGCAGGGTATGAGTGGGCTCGGAAGGAGTACATGAATGCAGAGAAGAGGTTTGAAGAGGCTGTGAAGATTAAATCGGATTTTTATGAAGGGCTGCTTGCTCTTGGGCATCAGCAGTTTGAGCAAGCAAGACTCTGCTGGTCTTATTTGATTGCGAACAATAAGGATTTGGAAGCCGGCCCTTCCGATGAGGTTCTGCAGTTCTATAACAAGGCGGAGGATAGCATGGAGAAAGGCATGTTGATGTGGGAGGAGATTGAGGAGCAGCGTTTGAATGGACTGTCCAAATCGGATAAGTATAAAGAGCAGTTAGAGAAAATGGGGTTGCATGGTCTTTTCAGGGATGTTTCTTCTGATGAAGCTGATGACCAGGCTGCAAGGATGAGGTTGCAAGTATATCTTTTATGGGGAACCTTGTTGTATGAGCGTTCTGTTGTGGAGTATAAGCTAGGCCTGCCAACATGGGAGGAATGTTTAGAGGTTGCAGTTGAAAAATTTGAACTGGCTGGAGCTTCTACAACTGACATTGGGGTCATGATAAAGAATCATTGTTCTAATGAAACAGCAATGGAAGGGTTCAAAATTGATGAGATAGTACAAGCATGGAATGAGATGTATGATGGGTGGCAGTTTGATGTTCCATCATTTCGACTTGAACCATTGTTTCGTCGGCGTGTTCCAAAACTCCATTACATCCTGGAGCAATTTTGA 2196 0.4913 MGKPTGKKKDPSTPPKANGHHHNPSKSLDDSNNNKRAAALDDDTAMFINMSQELREEGNRLFQKKDHEGAMLKYEKALKLLPKSHIDVAHLHTSMAMCYMQLGLGEYPRAINECNMALQVSPRYTKALLKRAKCYEALNRVDLAMRDVRVVLNLEPNNSTALEVLDSLRMTMEEKGIVVDETEIALAALQHQPEPASARLRKIVREKIKKKKEHKGGEDGGKAKKIIIEEKVKVENVKKKDNKDKDHKVHKDKEKRVVKEEKEKLGKEEKEKDKGVVTRTVKLIYGEDIRWAQLPVNCGMRLVRDVIRDRFPGLKGVLVKYRDREGDLVTITSTAELRLAETCHVLGSIRLYVTEIEPDQELCYDDGVAGVEDGGRMRMKVVENGGGDGGKGVGKGVSTVEDWLVQFARLFKNHVGFDSDAYLDIHGIGMKLYSEAMEDAVTSEGAQELFDIAADRFQEMAALALFNWGSVHMSRARKRVSIPEDGSRESEFEFVKAGYEWARKEYMNAEKRFEEAVKIKSDFYEGLLALGHQQFEQARLCWSYLIANNKDLEAGPSDEVLQFYNKAEDSMEKGMLMWEEIEEQRLNGLSKSDKYKEQLEKMGLHGLFRDVSSDEADDQAARMRLQVYLLWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGASTTDIGVMIKNHCSNETAMEGFKIDEIVQAWNEMYDGWQFDVPSFRLEPLFRRRVPKLHYILEQF* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0983 731 ProSiteProfiles TPR repeat profile. 51 84 IPR019734 GO:0005515
Gso14g0983 731 PANTHER PROTEIN PHOX4 1 730 - -
Gso14g0983 731 SMART tpr_5 125 158 IPR019734 GO:0005515
Gso14g0983 731 SMART tpr_5 51 84 IPR019734 GO:0005515
Gso14g0983 731 SMART tpr_5 490 523 IPR019734 GO:0005515
Gso14g0983 731 SMART tpr_5 89 124 IPR019734 GO:0005515
Gso14g0983 731 MobiDBLite consensus disorder prediction 1 35 - -
Gso14g0983 731 SMART PB1_new 278 356 IPR000270 GO:0005515
Gso14g0983 731 Coils Coil 251 271 - -
Gso14g0983 731 MobiDBLite consensus disorder prediction 238 269 - -
Gso14g0983 731 CDD PB1 280 353 - -
Gso14g0983 731 Gene3D - 277 356 - -
Gso14g0983 731 ProSiteProfiles PB1 domain profile. 278 356 IPR000270 GO:0005515
Gso14g0983 731 PANTHER PROTEIN CLMP1 1 730 IPR044517 -
Gso14g0983 731 SUPERFAMILY CAD & PB1 domains 278 362 - -
Gso14g0983 731 ProSiteProfiles TPR repeat profile. 125 158 IPR019734 GO:0005515
Gso14g0983 731 Gene3D Tetratricopeptide repeat domain 48 176 IPR011990 GO:0005515
Gso14g0983 731 SUPERFAMILY TPR-like 48 170 IPR011990 GO:0005515
Gso14g0983 731 MobiDBLite consensus disorder prediction 1 29 - -
Gso14g0983 731 Pfam PB1 domain 278 354 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0983 Gso-Chr14 13787879 13793002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0983 34 158 Calmodulin-binding Proteins AT3G25230 28.358 2.86e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0983 - - vra:106765155 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0983 14 13787879 13793002 Gso4g0554 4 5356735 5361068 PCT
Gso4g0554 4 5356735 5361068 Gso14g0983 14 13787879 13793002 PCT