Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0980 ATGTGGAGAGAGGGAGCGTTATTGGTGGTCCTGCTGCTGCTGCTCCTCCTAGTCCAGCAAAATTGTGCTACCAAGGATGAGCAAGAGCATGGTTGCCCTCCTTCTTCCTGTGGCAAAATCACCAGCATAACTTATCCATTTCGATTAAAAGGTGACCCAAAAAGCTGCGGCCACAACAGGTACGAGCTAGCTTGTGAAAATAATGTTACAGTGTTATATTTGTACTCCGGGAAATATCATGTACAGGCAATCAACTACAACAACTTCACAGTCCGAGTGGTTGATCCCGGAGTTCAACAACAAAACTACTCTTCCCTTCCACGCTATTTCTTGTCACAATCCAATTTCAGTGATTCCTATAGTGACGCCACGGATCCATACCAAGCCGGTCTAAAACCAATTAACAATTGGGCATGGCTCATTTTCCAGCATGTAGTGTTTATGAATTGTAGCCACCCAGTGACCTACAATCGTAAATATGTGGATACTGCTCCCTGCGTCAACTCTGACTCCAAAGGCTATTACATATACTCTATTGCTGGTGACTTAAAAGCACATGACTTTGAAGTTGGTTGTCACGTAAAGCTGGTTGCTCTCACATCTTGGTGGGGTTTCGACACAAACAATCATTCCTACACTGCCATGCACACGGGGCTAGTCTACGGATTCGAGATTTCATGGATGCACCTCGCCTGTGATAATCATTGTCGATATAAATATGGACGTTTATATAGATATGGATATGGAAATGGAAATAGATACTGCTATTTCGACTATTCCATCCAGAACCTTCGATGCCCTCTGTGTAATCGCCAACGTTCCCGCATTATATGTGGAATACTGGAAATACTGCTATTCGTTGCCGGTGCTGCCGAAATGGTCATTATGTTATTATGGCCATGCAAACTTTTGTTTGGGGTGCCACTGTTTATTACACTTTTTATACGTAAATGGAGAAAAAGACATATGTCAATATACGAAAGTATTGAAAATTATCTAGAACAAAATAATTTGATGCCTATTAGATACTCATACAAGGAAATTAAGAAGATGACCGGAGGTTTTAAAGAAAAGTTGGGTGAAGGAGGATATGGCTATGTGTTCAAGGGAAAATTGTGTAGCGGGTCTTGTGTAGCAATAAAAATGTTAGGTAAATCAAAAGGAAATGGCCAAGATTTTATTAGTGAAGTTGCAACCGCCGGAAGAATACATCATCAAAATGTAGTACAATTAATTGGATTTTGTGTCCAGGGGTCAAAACGTGCTCTTGTCTATGAATTCATGCCCAATGGATCTCTTGATAAACTTATTTTTTCCAAAGATGGAAGTATACATTTAAGCTATGACAAAATATATAACATATCAATTGGAGTGGCTCGTGGAATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTCGATATCAAGCCTCACAACATCCTATTAGATGAAAACTTCACCCCAAAGGTCTCTGACTTTGGATTAGCAAAGCTATATCCAATTGATAATAGCATTGTCACAATGACAACAACAAGGGGTACAATTGGGTATATGGCTCCAGAATTATTTTATAATAATATTGGAGGAATATCCCATAAGGCTGATGTTTATAGCTATGGAATGCTTTTGATGGAGATGGCAAGCAAGAGGAAAAATCTAAATCCCCATGCAGAGCGTTCAAGCCAACTTTTCTTTCCCTTTTGGATTTATAATCATATTGGAGATGAGGAAGATATAGAAATGGAAGATGTCACAGAGGAGGAAAAGAAAATAGCAAAGAAGATGATCATAGTTGCACTTTGGTGTATACAATTGAAACCGAATGATCGTCCCTCAATGAATAAAGTAATCGAAATGCTTGAAGGAGACATTGAGAACTTGGAAATACCTCCAAAGCCATCTTTATATCCAGGTGAAATGATCACAAAGGATGAAAAAATCAACACTAACGAGATAATATCAAGTGACTTCAGTAGTTCTTATTGTTCTATGTAA 2004 0.3912 MWREGALLVVLLLLLLLVQQNCATKDEQEHGCPPSSCGKITSITYPFRLKGDPKSCGHNRYELACENNVTVLYLYSGKYHVQAINYNNFTVRVVDPGVQQQNYSSLPRYFLSQSNFSDSYSDATDPYQAGLKPINNWAWLIFQHVVFMNCSHPVTYNRKYVDTAPCVNSDSKGYYIYSIAGDLKAHDFEVGCHVKLVALTSWWGFDTNNHSYTAMHTGLVYGFEISWMHLACDNHCRYKYGRLYRYGYGNGNRYCYFDYSIQNLRCPLCNRQRSRIICGILEILLFVAGAAEMVIMLLWPCKLLFGVPLFITLFIRKWRKRHMSIYESIENYLEQNNLMPIRYSYKEIKKMTGGFKEKLGEGGYGYVFKGKLCSGSCVAIKMLGKSKGNGQDFISEVATAGRIHHQNVVQLIGFCVQGSKRALVYEFMPNGSLDKLIFSKDGSIHLSYDKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPIDNSIVTMTTTRGTIGYMAPELFYNNIGGISHKADVYSYGMLLMEMASKRKNLNPHAERSSQLFFPFWIYNHIGDEEDIEMEDVTEEEKKIAKKMIIVALWCIQLKPNDRPSMNKVIEMLEGDIENLEIPPKPSLYPGEMITKDEKINTNEIISSDFSSSYCSM* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0980 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Gso14g0980 667 SUPERFAMILY Protein kinase-like (PK-like) 337 624 IPR011009 -
Gso14g0980 667 Pfam Wall-associated receptor kinase galacturonan-binding 32 95 IPR025287 GO:0030247
Gso14g0980 667 Pfam Protein kinase domain 356 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0980 667 Gene3D Phosphorylase Kinase; domain 1 327 427 - -
Gso14g0980 667 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 650 IPR045874 GO:0004672
Gso14g0980 667 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Gso14g0980 667 ProSiteProfiles Protein kinase domain profile. 353 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0980 667 Gene3D Transferase(Phosphotransferase) domain 1 428 636 - -
Gso14g0980 667 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 7 650 - -
Gso14g0980 667 SMART serkin_6 353 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0980 Gso-Chr14 13676145 13681097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0980 1 639 Receptor kinase-like Gene Family AT5G38260 34.697 1.09e-115 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso14g0980 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0980 - - gmx:100781099 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0980 14 13676145 13681097 Gso17g1818 17 36283806 36287398 GST