Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0970 ATGAAAACGAAGCTTCTTCTTATGCTTCTCATGCTCCTCCTTATTCTCCACAAACCCACTTGGATTCTTGCCTCTGCATACCCTCTTGCTCCCTCTCCTCAAGTTCCACCATTTTCTCCATTTCCCACTTCAATGTCTGCTTCCTCTCCAGGAATTGTGATGGGGGCTGAACAGCAACACATGGATTCACACAAGAAAATGGTAATTGCTGTTGCCGTTGCCAGCACTTCACTTGGTGCAGTCATTTTGTGTGTGTTGTGCATCTGGATTTACTACACAAAGTACCCTTCAAAATCCAAAGGGAAAAACGTTCAAAGATCAGATGCTGAGAAAGGGCTAGCTTCATCACCATTTTTGAGTAAATTCAGCTCTATAAAGCTGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGACTATAAGCAAATAGAAAAAACCACCGGAAATTTCGAGGAAATTAACATCTTGGGTGAGGGAGGTTTCGGATGCGTTTACAAGGCTCATTTGGATGATAATTTGGATGTTGCTGTTAAAAAATTGCACTGTGAAAATCAATATGCTGAGCAAGAATTTGAGAACGAGGTGGATTTGTTAAGTAAAATTCAACACCCAAATGTAATTTCTCTACTGGGTTGTAGCAGTAATGATGATACAAGGATTATTGTCTATGAATTGATGCATAATGGATCATTGGAAACTCAATTACACGGACCTTCTCATGGCTCGGCATTGACTTGGCATTTGAGGATGAAAATTGCTCTTGACACAGCAAGGGGATTAAAATATCTGCATGAGCACTGTTACCCTCCGGTGATCCATAGAGATCTGAAATCTTCTAATGTTCTTTTAGATACAAAGTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACCAATGGGTCCCAGAACAAGAATAACCTCAAGCTTTCAGGCACGTTGGGTTACGTTGCCCCGGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTGTATGCTTTTGGAGTTGTGCTTTTGGAGCTTCTATTGGGAAAGAAGCCTGTGGAAAAACTAGCACCAGCTCAATGCCAATCTATTGTCACATGGGCTATGCCACTGCTCACAGACAGATCTAAGCTTCCAAACATTGTGGATCCTGTAATTAAGAATACAATGGACCCCAAGCACTTATACCAGGTTGCTGCTGTAGCCGTGCTATGTGTGCAACCAGAACCAAGTTACCGTCCTCTGATTGCCGATGTTCTCCACTCATTGATCCCTCTTGTGCCAGTAGAGCTTGGAGGAACACTCAAAGTTTCACAACTGCCACAGCAAGTCTGA 1323 0.4195 MKTKLLLMLLMLLLILHKPTWILASAYPLAPSPQVPPFSPFPTSMSASSPGIVMGAEQQHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKTTGNFEEINILGEGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQEFENEVDLLSKIQHPNVISLLGCSSNDDTRIIVYELMHNGSLETQLHGPSHGSALTWHLRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNVLLDTKFNAKLSDFGLAITNGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGKKPVEKLAPAQCQSIVTWAMPLLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLKVSQLPQQV* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0970 440 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Gso14g0970 440 SUPERFAMILY Protein kinase-like (PK-like) 131 419 IPR011009 -
Gso14g0970 440 ProSiteProfiles Protein kinase domain profile. 149 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0970 440 Pfam Protein kinase domain 149 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0970 440 Gene3D Transferase(Phosphotransferase) domain 1 225 424 - -
Gso14g0970 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Gso14g0970 440 PANTHER BNAA04G14780D PROTEIN 36 436 - -
Gso14g0970 440 Gene3D Phosphorylase Kinase; domain 1 116 224 - -
Gso14g0970 440 SMART serkin_6 149 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0970 440 CDD STKc_IRAK 155 422 - -
Gso14g0970 440 PANTHER OS01G0750732 PROTEIN 36 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0970 Gso-Chr14 13225491 13230359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0970 27 365 Receptor kinase-like Gene Family AT1G80640 48.830 1.05e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Gso14g0970 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0970 - - gmx:100812044 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0970 14 13225491 13230359 Gso17g1826 17 36522343 36527620 GST
Gso14g0970 14 13225491 13230359 Gso4g0540 4 5212559 5216457 PCT
Gso14g0970 14 13225491 13230359 Gso6g0534 6 4941222 4956199 PCT
Gso4g0540 4 5212559 5216457 Gso14g0970 14 13225491 13230359 PCT
Gso6g0534 6 4941222 4956199 Gso14g0970 14 13225491 13230359 PCT