Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0968 ATGGCCAGACCTCAACAGCGTTACCGAGGTGTCCGACAAAGGCATTGGGGTTCTTGGGTCTCCGAAATTCGCCGCCCTATATTGAAGACTAGGATATGGCTTGGTACATTTGAAACAGCTGAGGATGCAGCCAGAGCCTATGATGAAGCAGCCAGGCTAATGTGTGGTGCAAGGGCAAGGACAAACTTCCCTTTCAACCCAAATGTGCCACACTCATCATCTTCTAGTTCAAAGCTTCTCTCAGCAACTTTAACTGCAAAACTTCACAGTTGCTACATGGCTTCTTTGCAAATAACAAGACAAGCTTTGGAATGTGAGTCTCAGAGAACACCCTCAGTGCCAAATGCAACCTCCACAACCACACTATTTAGCAACTTCAGTGTGAGGAGTGAGCAAACTCCTGCAGTGTTGCCACACAAGAGACCAGAGGAGGAGCAAGAGTCAGAGGCCAACAGGGGTGGGAAAAGGGTTAAAGCTGTGGAAAATGTTCCTCTACAATTTAAGCCTCTTGAGGAAGATCACATAGAGCAAATGATTGAGGAGCTTCTTGATTATGGATCTATTGAGCTCTGCTCTGTCATTCCACCCCAGGCCCTCTAA 600 0.4717 MARPQQRYRGVRQRHWGSWVSEIRRPILKTRIWLGTFETAEDAARAYDEAARLMCGARARTNFPFNPNVPHSSSSSSKLLSATLTAKLHSCYMASLQITRQALECESQRTPSVPNATSTTTLFSNFSVRSEQTPAVLPHKRPEEEQESEANRGGKRVKAVENVPLQFKPLEEDHIEQMIEELLDYGSIELCSVIPPQAL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0968 199 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Gso14g0968 199 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Gso14g0968 199 MobiDBLite consensus disorder prediction 130 156 - -
Gso14g0968 199 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Gso14g0968 199 MobiDBLite consensus disorder prediction 136 156 - -
Gso14g0968 199 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Gso14g0968 199 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Gso14g0968 199 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Gso14g0968 199 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 193 - -
Gso14g0968 199 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE 1 193 - -
Gso14g0968 199 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Gso14g0968 199 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0968 Gso-Chr14 13122804 13124406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0968 1 199 AP2-EREBP Transcription Factor Family AT5G25190 60.680 3.02e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso14g0968 AP2 4.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0968 - - gmx:100807612 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0968 14 13122804 13124406 Gso17g1828 17 36564727 36566032 GST
Gso14g0968 14 13122804 13124406 Gso4g0538 4 5198619 5199946 PCT
Gso14g0968 14 13122804 13124406 Gso6g0532 6 4927669 4928903 PCT
Gso4g0538 4 5198619 5199946 Gso14g0968 14 13122804 13124406 PCT
Gso6g0532 6 4927669 4928903 Gso14g0968 14 13122804 13124406 PCT