Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0963 ATGGAAGGACTAAGCATGAAGGAGCCATACTTTTGTGACAGACCAAGTTCAACACGCATCTTCTCTTCTTCTGATCCTCCAGAGGCTCCCCCAAGCCCAAGTACCCCACTTCAGCATTCGCATGAAAAGAAGAAACAGCTATGTGTTGAGGAAGAAGAGGAATTAGAAAAGGAGCCAAAGCAACATGTTAGTGTTACCCTTTTGGATCTGAATATTATCTCAGGTGAAGATGATAATTCATGCACTCCAGAAGGACCAGAACTCAACCTCATCACTTGTTTGGATGTGGGGTCATCATCCAATAATGCTAATTCTTCATCAGAAACAACAACACCTCTTGGTGGTTCTTCTGATCATACTGAGCCTAGAGTGTTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGTTCACAAGCACTAGGTGGCCACCAAAATGCACACAAGAGGGAGAGATCAATTGCAAAGAGAGGGCACAGGTTTGGATCACAGATAATGGCCTTCGGCCTTCCCCTTTTGCACCATAACAACAACATCCGTTTTGCAAGCATGGCTTCTCTACCCCTTTATCATAGCAATAGAGGAACTCTTGGAATTCAGGCACACTCCATGATCCAGAAGCCTTCTTCTTCTCATCTTCATGTGAATGGCTTTGGAGGCTCTTATGCACATCATCATGGTTGGTCAAGACCAATCATTGATCAACAACCCGGAATAGCAAAGCTTGCTGCGCCAGATTTTCATCACAGAACAAAATCAGCATTATCATCATCACAAAGCAGCGTTGGTAGGTTTGAAATGGTTAATAGTAGTAATACCATGTTGAATTCTGCAGCCACTAATAACGAAATCGGTGGATGTGTGGCTATTGGTGGAACTCGTTTGAAGAGTACTACTAATCAAGAAGAAATGAAGCACCTTGATTTGTCCCTAAAGCTCTGA 939 0.4324 MEGLSMKEPYFCDRPSSTRIFSSSDPPEAPPSPSTPLQHSHEKKKQLCVEEEEELEKEPKQHVSVTLLDLNIISGEDDNSCTPEGPELNLITCLDVGSSSNNANSSSETTTPLGGSSDHTEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQIMAFGLPLLHHNNNIRFASMASLPLYHSNRGTLGIQAHSMIQKPSSSHLHVNGFGGSYAHHHGWSRPIIDQQPGIAKLAAPDFHHRTKSALSSSQSSVGRFEMVNSSNTMLNSAATNNEIGGCVAIGGTRLKSTTNQEEMKHLDLSLKL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0963 312 MobiDBLite consensus disorder prediction 99 118 - -
Gso14g0963 312 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 312 IPR044246 GO:0009788
Gso14g0963 312 SUPERFAMILY beta-beta-alpha zinc fingers 121 152 IPR036236 -
Gso14g0963 312 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 312 - -
Gso14g0963 312 Gene3D Classic Zinc Finger 99 165 - -
Gso14g0963 312 MobiDBLite consensus disorder prediction 38 61 - -
Gso14g0963 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 125 152 IPR013087 -
Gso14g0963 312 MobiDBLite consensus disorder prediction 1 61 - -
Gso14g0963 312 ProSitePatterns Zinc finger C2H2 type domain signature. 127 147 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0963 Gso-Chr14 12943017 12944520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0963 32 312 C2H2 Transcription Factor Family AT5G10970 39.661 7.01e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso14g0963 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0963 - - gmx:100809569 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0963 14 12943017 12944520 Gso17g1832 17 36693955 36695603 GST
Gso14g0963 14 12943017 12944520 Gso4g0535 4 5151384 5152501 PCT
Gso14g0963 14 12943017 12944520 Gso6g0529 6 4888739 4889927 PCT
Gso4g0535 4 5151384 5152501 Gso14g0963 14 12943017 12944520 PCT
Gso6g0529 6 4888739 4889927 Gso14g0963 14 12943017 12944520 PCT