Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0955 ATGGCAAACTACCACCGCAACAACGTAGAAAACGTCGTCCTCGGCCACCACCACCGTTCCAAGTCCGCCTCCGTCGCCGGCCACACCTTCCGCCTATGTACCGCCGCCTCCTTCCGCCGCCTCATCTTTGACGCCGTCAGCTGCGGCGCCAGCTCTCGCTACGCCGCGAGATCCAACACCTCCTCCGACGGCGAGAAACAGCAAAAGCAAAAACCTAAGACGTCGTCGAGGAAGCCGAACAATGCGAAGTCGGAGAAGCTCTCGGATCTGCTGAGCATTGCGGAGGCTGAAGCCGACGTGGAAACGAAGAAGAAGGAAGAAAAGCTGGAAGAACTGAAGCTCCTCGTGAAGGAGCTTCAGCAGCACGAAGAAGTAGATGATTCAACGAAGAAAAAAAGAGAAGCTGCGGCGAAAGTGAGGTTGTTGGCGAAAGAGGATTTGGAAGTAAGAGGAACGCTCGCTATGCTAGGAGCCATTCCTCCTCTCGTCGCAATGCTCGATGAAACCGAACTAAACGACGTCGATTCGCTCATCGCGTCGCTCTACGCGCTGCTTAACCTCGGCATCGGAAACGACGCGAACAAAGCGGCTATTGTGAAAATTGGGTCTGTTGAGAAGATGCTCAAGTTTATTGAATCTCCAGATGATCTAGATTCTTCGGTTTCTGAAGCAATTGTTGCAAATTTCCTTGGATTGAGTGCTTTGGATTCGAACAAGCCCATGATTGGGTCTTCGGCTTCAATTTCATTCTTAGTTAGAACCCTTCAGAGTTTAGATGATAAGAGCAGTTCCCAAGCCAAGCAAGATGCTCTCCGAGCATTGTACAATCTTTCAATCTTCCCAGGCAATGTTTCATTCATTTTGGAAACCGATTTGGTAGTGTTTCTGGTGAACTCAATAGGGGACATGGAGGTTACTGAAAGATCCCTTGCAACTCTCAGCAATATAGTGTCCACCCGAGAGGGTAGAAAGGCGATCAGCACGGTGCCGGATTCTATCCCAATTTTGGTGGATGTGTTGAATTGGACTGATTCGCCGGAATGCCAGGAGAAGGCATCATACATTTTGATGGTTATGGCACACAAGTCCTATGGTGACAAGCAGGCCATGATTGAGGCAGGGGTTGCATCATCCCTGCTTGAGTTGTCCCTTTTGGGTTCCACATTGGCTCAGAAAAGGGCCTCAAGAATATTGGAGATTTTGAGGGTGGACAAAGGGAAGCAAGTTTCTGGGAGCTATGGCTTGGGTGCAGCTGTCTCTGCCCCTATTTGCGGCTCTTCGTCGGCGAGGCCAGACGGAGGAGGAGGAGGAAGAGAGTGTTTTGAGGAGGACGAAGAGATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAGAACAACATGAGGAAAATTGTAAAGAGGGCCAACTTGCCTCACGATATCGCGCCATCAGATCATTTTATGTCACTCACTTCAAGTTCTACTTCAAAGAGCCTGCCATTTTGA 1503 0.4977 MANYHRNNVENVVLGHHHRSKSASVAGHTFRLCTAASFRRLIFDAVSCGASSRYAARSNTSSDGEKQQKQKPKTSSRKPNNAKSEKLSDLLSIAEAEADVETKKKEEKLEELKLLVKELQQHEEVDDSTKKKREAAAKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDETELNDVDSLIASLYALLNLGIGNDANKAAIVKIGSVEKMLKFIESPDDLDSSVSEAIVANFLGLSALDSNKPMIGSSASISFLVRTLQSLDDKSSSQAKQDALRALYNLSIFPGNVSFILETDLVVFLVNSIGDMEVTERSLATLSNIVSTREGRKAISTVPDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGVASSLLELSLLGSTLAQKRASRILEILRVDKGKQVSGSYGLGAAVSAPICGSSSARPDGGGGGRECFEEDEEMMSEEKKAVKQLVQQSLQNNMRKIVKRANLPHDIAPSDHFMSLTSSSTSKSLPF* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0955 500 Coils Coil 441 461 - -
Gso14g0955 500 SMART arm_5 280 318 IPR000225 GO:0005515
Gso14g0955 500 SMART arm_5 146 189 IPR000225 GO:0005515
Gso14g0955 500 SMART arm_5 191 234 IPR000225 GO:0005515
Gso14g0955 500 SMART arm_5 235 279 IPR000225 GO:0005515
Gso14g0955 500 SMART arm_5 322 361 IPR000225 GO:0005515
Gso14g0955 500 Coils Coil 91 125 - -
Gso14g0955 500 MobiDBLite consensus disorder prediction 64 88 - -
Gso14g0955 500 Gene3D - 301 466 IPR011989 -
Gso14g0955 500 MobiDBLite consensus disorder prediction 54 88 - -
Gso14g0955 500 Gene3D - 51 300 IPR011989 -
Gso14g0955 500 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 500 - -
Gso14g0955 500 SUPERFAMILY ARM repeat 101 401 IPR016024 -
Gso14g0955 500 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0955 Gso-Chr14 12545713 12549167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0955 97 422 U-box Gene Family AT1G24330 28.736 3.11e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0955 - - gmx:100808483 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0955 14 12545713 12549167 Gso17g1841 17 36992034 36994597 GST
Gso14g0955 14 12545713 12549167 Gso4g0529 4 5077181 5079027 PCT
Gso14g0955 14 12545713 12549167 Gso6g0525 6 4824826 4826801 PCT
Gso4g0529 4 5077181 5079027 Gso14g0955 14 12545713 12549167 PCT
Gso6g0525 6 4824826 4826801 Gso14g0955 14 12545713 12549167 PCT