Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0933 ATGTCTTCCCATGGTGGGACCACCACTACGCCACCACCCTTAAATGTCACCATGGTGGCTGTAGAGAAAGACAAGAACAGTGGCTATGCCTTCCGTTGGACAATTGAACACATTGATAACCCAGTCATCATTGCAGTCCATGTCAAGCACAAAAACATTCCTCATCATGAGGGTACCAATGTTTTTCCTCCCGACGAAGACGATATAGCCCATGTTTTCAAGCCCTTACGTCACATGTGTCATGGAAAAGTTGTTATGTTGAAAGAAGCCGTAATCGATGATAGTGATATTGTGAAAGGAATTGTGGAATATGCACAGAGAAATCGCGTCAATACTATAGTCGTTGGTGCACCCCACTCGTCCAGGAATACTTTGGCACGAACTCTGAACCTGAGGAGCGGAAGCAAAAAATTTAAAGGCCATCACGATGTGTCAACAGGCGTAATGAAATCAGCTCCAGATTATAGTTCAGTGTACGTAATTTCAAAAGGGAAGATAGTGGGAGCTCGACCAGCAATACGCCCAATGATAAACGTGGTTCCATCACAAAAGGAAAATGGAGTAAGGACATATTCACATAGAAGAGGGAGCACCAATGGAAGATCAGAAAGATCAGCTCTACTTGAAATGCCAAGGTGTTCTTCAGCTGGTCAGACAATGAATCAGAGGTCACTATTTAGCCATACCTCAGGTTATAGTGACTCTTCAGGGTCGCATAAGTTTGAGTCAGCAGATGGAAATAAACAAGATTGTGATTTAGGCTCTACATCAGATTCCCAATTCTTAGGAGATATGGAAGCTGAGATGAGAATGTTGAGGCTTAAACTGAAGCAAACTATGGACATGTACAACTCAACATGCAAAGATGTAATCTTAGCACAAACCAAGGCTAAGGAGATTAACCAATGGAAGGAGGAACGTATAGCTGAGGAAGCTACTAAGTTGCCTAAAGAGGCAGCTCTAGAACTGGCAGAAAAGGAGAAAGTTAAAGCTCAAGCTGCCTTGGAAGCATATGAGGAAGCCATTAAGATGGTTGAAAAGGAAGCACAAAGAAGAATTCAGGCAGAGGTGAAGGCTAGGAGAGAGGCGCAAGAAAAGGATCGAGCATTAAATCTGTTGATTATCAACGATACTCGGTACAGAAAATACAGTATAAAGGATATTGAAGAGGCCACTCAGAAGTTTTCCCCATCATTGAAAGTAGGTGAAGGTGGATATGGACCTGTGTTTAGAGGCCAACTTGATCACACCCCGGTTGCAATCAAAATTTTAAACCCTGATGCTTCCCATGGAAGGAGGCAGTTCCAACAAGAGGTTGAGATATTATGCAGCATAAGGCATCCTAACATGGTCCTCCTCCTTGGTGCGTGTCCCGAGTACGGATGCCTAGTGTATGAGTACTTGGAGAATGGTAGCTTAGAAGATAGATTGTTGATGAAAAATGACAGCCCTCCGATTCCATGGTGGAAACGTTTTGAAATAGCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAGCCAATTGTGCACCGGGACCTTAAACCCGCAAACATTCTCTTGGACAAGAACTTTGTGAGCAAAATAAGTGATGTTGGTCTTGCAAGACTAGTGCCACCATCTGTGGCTGACTCTGTCACACAGTATCACTTGACTGCAGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTACCAACAAACAGGAAAGTTAACAAAAAAATCAGATATCTATTCCTTGGGGATAATGCTACTACAAATCATCACTGCCAAGCCTCCAATGGGGCTTGCACACCATGTTAGGATGGCAATTGAGAAGGAAACATTTTCAGAAATGCTTGATATTATGATCAGTGATGTGCCACTGGAAGAGGCTCTAGCATTTGTCAAACTCTCATTGAGTTGTACAGAGCTCAGCAAAAAGGACAGGCCTGATCTTGCAACAGTGGTGGTGCCAGAGCTTAACCGTTTAAGGGACTTTGGATTGGCATTTCAGAACCGTAGCCACCCTCCACACCTTCCCACGCCTACGCGAAGTCCACGATCAAGTACTTAA 2067 0.4378 MSSHGGTTTTPPPLNVTMVAVEKDKNSGYAFRWTIEHIDNPVIIAVHVKHKNIPHHEGTNVFPPDEDDIAHVFKPLRHMCHGKVVMLKEAVIDDSDIVKGIVEYAQRNRVNTIVVGAPHSSRNTLARTLNLRSGSKKFKGHHDVSTGVMKSAPDYSSVYVISKGKIVGARPAIRPMINVVPSQKENGVRTYSHRRGSTNGRSERSALLEMPRCSSAGQTMNQRSLFSHTSGYSDSSGSHKFESADGNKQDCDLGSTSDSQFLGDMEAEMRMLRLKLKQTMDMYNSTCKDVILAQTKAKEINQWKEERIAEEATKLPKEAALELAEKEKVKAQAALEAYEEAIKMVEKEAQRRIQAEVKARREAQEKDRALNLLIINDTRYRKYSIKDIEEATQKFSPSLKVGEGGYGPVFRGQLDHTPVAIKILNPDASHGRRQFQQEVEILCSIRHPNMVLLLGACPEYGCLVYEYLENGSLEDRLLMKNDSPPIPWWKRFEIAAEIATALLFLHQTKPEPIVHRDLKPANILLDKNFVSKISDVGLARLVPPSVADSVTQYHLTAAAGTFCYIDPEYQQTGKLTKKSDIYSLGIMLLQIITAKPPMGLAHHVRMAIEKETFSEMLDIMISDVPLEEALAFVKLSLSCTELSKKDRPDLATVVVPELNRLRDFGLAFQNRSHPPHLPTPTRSPRSST* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0933 688 SUPERFAMILY Protein kinase-like (PK-like) 375 654 IPR011009 -
Gso14g0933 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Gso14g0933 688 Gene3D HUPs 7 153 IPR014729 -
Gso14g0933 688 SMART serkin_6 395 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0933 688 CDD STK_N 16 164 - -
Gso14g0933 688 MobiDBLite consensus disorder prediction 669 688 - -
Gso14g0933 688 Gene3D Transferase(Phosphotransferase) domain 1 468 669 - -
Gso14g0933 688 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 8 687 - -
Gso14g0933 688 MobiDBLite consensus disorder prediction 226 240 - -
Gso14g0933 688 Coils Coil 321 366 - -
Gso14g0933 688 PANTHER OS02G0152300 PROTEIN 8 687 - -
Gso14g0933 688 Pfam Protein tyrosine and serine/threonine kinase 400 654 IPR001245 GO:0004672|GO:0006468
Gso14g0933 688 MobiDBLite consensus disorder prediction 184 204 - -
Gso14g0933 688 Gene3D Phosphorylase Kinase; domain 1 375 467 - -
Gso14g0933 688 MobiDBLite consensus disorder prediction 226 258 - -
Gso14g0933 688 ProSiteProfiles Protein kinase domain profile. 395 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0933 Gso-Chr14 11876254 11889337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0933 87 665 Receptor kinase-like Gene Family AT5G12000 55.412 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso14g0933 PK_Tyr_Ser-Thr 2.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0933 - - gmx:100786386 1318.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0933 14 11876254 11889337 Gso14g0933 14 11876254 11889337 ECH
Gso14g0933 14 11876254 11889337 Gso17g1852 17 37251281 37255944 GST