Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0929 ATGAACCAAATGAGTACTAAAAGGAACACATGGAAGTCTGTGATCTTGATCCTAAGTTGTTACAAGGTTAAGTGTTCCTTGGAGGAATCAGAGAAACAGGTCTTAAAACAAGGTTCTTTCCAGAGGCTATGCCTATCTGATGTGAGCAATTCAAGCTCCACTCAGGCCATTGAAGATATTTCAATTTCATTCGCTGGCTCAAAGCTCTATGCATTCACACTTGAGGAGCTAAGGGAAGCAACAAACAGTTTCTCATGGAGTAACATGCTAGGTGAAGGAGGGTTTGGACCTGTTTACAAGGGTTTTCTTGATGACAAACTTAGGTCTGGTTTGAAGGCTCAGACTATAGCTGTGAAAAGGTTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAACTAAGGCATCCGCATCTTGTCAAGTTAATTGGGTACTGTTATGAGGATGAACATAGGCTTTTGATGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTATTCAGAAAATACTCTGCCGCCATGCCATGGTCAACTAGGATGAAAATTGCATTAGGAGCTGCCAAGGGTCTGACCTTCCTACACGAAGCAGATAAGCCTGTAATATATCGCGATTTCAAAGCTTCAAACATTTTACTAGACTCAGATTTCACAGCTAAACTCTCTGATTTTGGGCTAGCTAAGGATGGCCCTGAAGGGGAAGACACACACGTAACAACACGCATAATGGGAACACAAGGTTATGCTGCTCCTGAGTACATCATGACAGGTCACCTTACAACCAAGAGTGATGTGTATAGCTATGGAGTGGTGCTGTTGGAATTGCTTACAGGAAGACGAGTAGTGGATAAATCTCAGTCAAATGGAAGGAAGAGCTTGGTGGAATGGGCAAGGCCTTTGTTGAGAGATCAGAAAAAGGTGTACAGCATCATAGATCGTAGACTAGAAGGGCAATTTCCCATGAAAGGAGCCATGAAAGTTGCTATGTTGGCTTTTAAATGCTTGAGTCATCACCCAAATGCAAGGCCCTCTATGAGTGATGTGGTGAAGGTATTGGAGCCACTTCAGGACTATGATGATGTTTTCATTGGACCATTTGTGTATGTTGCCGTAAGTGAAAATGGTGACAAACATAAAATATAG 1170 0.4274 MNQMSTKRNTWKSVILILSCYKVKCSLEESEKQVLKQGSFQRLCLSDVSNSSSTQAIEDISISFAGSKLYAFTLEELREATNSFSWSNMLGEGGFGPVYKGFLDDKLRSGLKAQTIAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLMYEYMPRGSLENQLFRKYSAAMPWSTRMKIALGAAKGLTFLHEADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVDKSQSNGRKSLVEWARPLLRDQKKVYSIIDRRLEGQFPMKGAMKVAMLAFKCLSHHPNARPSMSDVVKVLEPLQDYDDVFIGPFVYVAVSENGDKHKI* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0929 389 PANTHER OS01G0588500 PROTEIN-RELATED 23 386 - -
Gso14g0929 389 Gene3D Phosphorylase Kinase; domain 1 45 166 - -
Gso14g0929 389 SUPERFAMILY Protein kinase-like (PK-like) 60 363 IPR011009 -
Gso14g0929 389 CDD STKc_IRAK 90 364 - -
Gso14g0929 389 PANTHER KINASE 1B 23 386 - -
Gso14g0929 389 Gene3D Transferase(Phosphotransferase) domain 1 167 371 - -
Gso14g0929 389 ProSiteProfiles Protein kinase domain profile. 84 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0929 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Gso14g0929 389 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0929 Gso-Chr14 11725300 11728254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0929 72 361 Glycoside Hydrolase AT3G07070 52.560 5.32e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso14g0929 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0929 - - gmx:100802636 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0929 14 11725300 11728254 Gso14g0929 14 11725300 11728254 ECH
Gso7g0349 7 3280987 3283384 Gso14g0929 14 11725300 11728254 ECH
Gso14g0929 14 11725300 11728254 Gso17g1854 17 37290478 37293425 GST