Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0920 ATGGTGAAACCAGCCATGGCTAGTGTTGATTCTTCTTCCTTTTCTTCTTGTAAAAATGATTCATTTTCCTCTAACTACAGCATTGATACTTGCAAGATGTACAAAGGGGTAAGGAAGAGAAAATGGGGCAAATGGGTGTCCGAAATTCGGCTTCCCAACAGCCGTGAGCGCATATGGTTGGGGTCCTATGACACCCAAGTGAAGGCGGCCAGAGCATTTGATGTCGCACTTTATTGCCTACGTGGCAAAAGTGCGAGTTTCAACTTTCCTGACACACCTCGACACTTGGAAATTAATATGGTGTTACCATGTGACATACAACAACAACCTCTCTCCCATCCGGAGATTCAAGAGATAGCCTCGAAGTTTGCGAACAACGACCACGTCCCTTTGGAGGAGGAGAGTGCTTTTCAAGAACAAGAACAAGACCCCTCGATGGAGTCACAAAGTGACGAGTCTAAATCTGCCAATACAATAACGGAGATGAGCAACTTCCCTAATATTTATGATGGTGGAACTCATACTAATGTACAAGTGGATCAATTACAAGGGGATTGGGACAGCATGGATTGGACATTTTTTAACATGTTGGATGACTTGAATGGCTCGGATTTTGGCCTCTATTTGGGGCCAGACAAGTTGCACCCGGGTGAGTTTTTGTGTCCCACTCAAGCTCCAATGCTTTTTCATGAGGATGAAATTGAAGGTGATGATGATCATGATGCTTTTTCTAACCATTCCTTACTTTGGAGTTGGAACTTTTGA 765 0.4379 MVKPAMASVDSSSFSSCKNDSFSSNYSIDTCKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQVKAARAFDVALYCLRGKSASFNFPDTPRHLEINMVLPCDIQQQPLSHPEIQEIASKFANNDHVPLEEESAFQEQEQDPSMESQSDESKSANTITEMSNFPNIYDGGTHTNVQVDQLQGDWDSMDWTFFNMLDDLNGSDFGLYLGPDKLHPGEFLCPTQAPMLFHEDEIEGDDDHDAFSNHSLLWSWNF* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0920 254 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Gso14g0920 254 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Gso14g0920 254 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Gso14g0920 254 MobiDBLite consensus disorder prediction 133 156 - -
Gso14g0920 254 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Gso14g0920 254 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Gso14g0920 254 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 254 - -
Gso14g0920 254 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Gso14g0920 254 MobiDBLite consensus disorder prediction 141 156 - -
Gso14g0920 254 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Gso14g0920 254 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF016 13 254 - -
Gso14g0920 254 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0920 Gso-Chr14 11469087 11470195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0920 34 170 AP2-EREBP Transcription Factor Family AT1G19210 51.034 3.53e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso14g0920 AP2 2.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0920 - - gmx:112999363 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0920 14 11469087 11470195 Gso14g0920 14 11469087 11470195 ECH
Gso14g0920 14 11469087 11470195 Gso17g1859 17 37352720 37353807 GST