Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0918 ATGGAATCGGAGGATTTGGTCAAACAGGAATTGGAGGAATTGCAGAAACAATTGGGGAAGAAGCAAAAGTTTGAAGCTTCTGTTTCGTCTCTTAAAACCCTTCTCCAACGCACTTACCCATCAGCTTCCCCGGCGCTTCGTAAATCCTTTTATTCAGTTCTATGCCGAGTTGCTACTGTGTTGAAGACCAGGTATACAGCACCAGGTTTCTGGAATGCTGGACTGGGCCTTTTTGAGCAGGCTCATTTGCTTGTTTCTGATCCTTCTGAGAAGGAGCACTTGAAGGCTTGCATTGCTCAGGCCAGGGAACATTTGCATCTAGAAGACAACCCATCACAAACTTTACGACCTGCAGATAATCAGGCAAACAGAGGGTATCTTTTTGAGGGCCACCTTACGGTTGATCCTGAACCGCCTCAGCCGCAATGGTTGGTGCAGTCAAACCTCTTGACAACAGCTGCTACACTCTTTGCTGCTGAATCCTCTCAAGCTTCAGAAGCAAATGAAACCACTCAAGATGATGCCACAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTGATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAGGTCGTGGCAAATCTTCCGGTCATTACTCTCACAGAGGAAATCCTGGCTAATTTAGGGAAAGATGCAGAGTGTGCAATTTGCAGGGAGAACTTGGTTTTAAATGACAAAATGCAAGAGTTGCCATGCAAGCACACATTCCACCCACCATGTCTAAAGCCATGGCTGGATGAGCACAATTCTTGTCCCATCTGTCGGCATGAGCTGCAAACTGATGATCATGCCTATGAGAGCTGGAAGGAGCGTGAAAAGGAAGCTGAAGAAGAGAGGAAAGGTGCTGAAAATGCAATTCGAGGTGGTGAATACATGTATGTTTAA 942 0.4607 MESEDLVKQELEELQKQLGKKQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKTRYTAPGFWNAGLGLFEQAHLLVSDPSEKEHLKACIAQAREHLHLEDNPSQTLRPADNQANRGYLFEGHLTVDPEPPQPQWLVQSNLLTTAATLFAAESSQASEANETTQDDATNMLEDLLNRLEEVVPLMVDVGPVAPRAPPASKEVVANLPVITLTEEILANLGKDAECAICRENLVLNDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAEEERKGAENAIRGGEYMYV* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0918 313 MobiDBLite consensus disorder prediction 294 313 - -
Gso14g0918 313 SUPERFAMILY RING/U-box 227 280 - -
Gso14g0918 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 280 IPR013083 -
Gso14g0918 313 Pfam Ring finger domain 232 274 IPR001841 -
Gso14g0918 313 PANTHER ABI3-INTERACTING PROTEIN 2-1 7 307 - -
Gso14g0918 313 ProSiteProfiles Zinc finger RING-type profile. 233 274 IPR001841 -
Gso14g0918 313 SMART ring_2 233 273 IPR001841 -
Gso14g0918 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 7 307 - -
Gso14g0918 313 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0918 Gso-Chr14 11275096 11278221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0918 7 313 C3H Transcription Factor Family AT5G20910 64.821 6.08e-134 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0918 K16274 - gmx:100798732 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0918 14 11275096 11278221 Gso14g0918 14 11275096 11278221 ECH
Gso14g0918 14 11275096 11278221 Gso17g1868 17 37429703 37432756 GST