Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0914 ATGGTTTGCGAGATGGAGAGTGACTGTATTGAGGACATGGACATTGAAGTCCTCTCTTCAATGTGGCCTGAAGATATTGGCACTGATGTTGGAAAACAGTTCAATATAGAAAAGCCTGGAAGAGACCAGGATATGTTGGAGGAAGTCACAATCATAGAGGAGCCAACTATAGCTGATTTCCAGCGTCTCATGGAGCTTACAAATTACACAGATAAAGGGTCTTCTCAGCTGGCATACCTCATGAAACACTGGGAGTATAAGCAGGCTAACGCGGTTCGGCTTCTCAGAGAGGAACTTGACAACCTTAGCAAACAAAGGAAGGAAGTTGAGCTCAGGAAGTTGGAGATACTCAAAGACACTCGGTTCGAGGAAGAGAATTATGGCGGTGACAAGCGCCCAGTTTCTATATTGGATGAGGTGTACTATACATGGCAAGATGTGCCCGTGCCATTAAGGAAAAGTAATATAGTTGTGCAAACCAAGAGGATTGAAATTGATGCTGAGTATGATACTGTTGTGTATTGGAAACAACGGGCGCTGCAGTTGGAAAGACAGTTGGAGGCAAGTGTGCAGAGGGAGCAGATACTAATGGACAAGTTGGAAGAAAGTGTAAAGAATCTTGAAAGGCAGTCTTCACCTGTGGAAGAACTATCTCAGATTCTGAAGAGAGCAGATAATTTCTTACATTTTATTCTCCAAAATGCACCTGTTGTTATTGGCCATCAGGACAAAGAGTTGCGCTATCGCTTTATCTACAATCATTTTCCGAGTTTACAAGAGGAGGACATCATAGGAAAAACAGATGTTGAAATTTTCACAGGATCCGGTGTTAAGGAATCTCAGGATTTCAAGAGGGAAGTAATGGAAAAAGGGTTGCCTGCAAAAAAGGAAATTACTTTTGAGACAGAATTATTTGGGTCAAAGACATTCTTGATATATGTAGAACCTGTCTTTAGCAAAGCAGGAGAGACAATTGGAGTAAACTACATGGGAATGGAAATAACAGATCAGGTAAGAAAAAGAGAAAGAATGGCAAAGCTCAGGGAAGAGATTGCAGTCCAGAAAGCAAAGGAAACAGAACTTAATAAAACCATTCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCAACAATGTCTCATGAGATAAGATCTCCTCTGTCTGGAGTTGTTAGCATGGCTGAAATTCTTTCCACCACGAAACTTGATCGGGAGCAAAGGCAGCTCTTGAATGTCATGATATCTTCAGGAGATTTGGTTCTTCAGCTTATAAATGACATTCTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAATTGGAAGCTACAAAATTCCGGCCAAGAGAGGTAGTAAAGCATGTACTCCAGACAGCTGCAGCTTCATTGCAGAAAATGTTAACCTTAGAAGGAAATGTGGCAGATGATATGCCTATTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAGATTCTCACAAATTTAGTCAGCAATGCGGTAAAGTTTACACATGAAGGCAAAGTTGGAATAAACCTTTATGTCGTTCCAGAACCACCTTTTGCCAAAGCAGAAGGCCATCAAAAGATGATCACAGAACAGTCAACAAATTCAGCAAATGGGGTGAAGGAAGAGAAACGTGCATCAACGCCGCGAAGCAGCAGCGATCAAAATTGTCTTGATGGTCAGAAACACAATGACCATCCTAGCCAAAATCATGCATTCAATGATGAATGTAGATCTTCAGTTAAAAGTGAATGCTCAATGAATGGAGATACTGAGGAGCAAACGCATTCAACTGAAACTGTGTGGATACGTTGTGATGTATATGACACAGGAATCGGAATACCTGAAAAGGCTATACCTACTTTATTTAGAAGGTACATGCAAGTAAGTGCTGATCATGCTCGAAAGTATGGTGGCACAGGGCTGGGACTAGCAATATGCAAACAGCTGGTTGAGTTAATGGGGGGTCGCCTAACAGTGACTAGCAAAGAACATGTTGGTTCTACCTTCACATTCATACTTCCTTACAAGGTTTCAACAGCTTGTGATGATTCTGATGACCCAGATGAGCTCTCAGATGTGGATGATAATGATGATGACACAACAGAGGGGTTCTTCCAATTCCAACCACGCACTTTGGGCTCTCTCTTCACTTCTAATGGACCTACCAGGCCCCAAAATATACTACCAGGTTTCAGAAGCTCACACAAGTTCAATGGCATTTCAGAAAATTCTTACTCATTCCTCACTACCAACACAAGATCAAAAGGGATTAGTTCAACTGAGGATGCATCTTCAGTCATTGTTGATGCTCCAGAGATGTCTGAATCAACAAGTTCATCAAGTCACAGCCCAGAAACAAAGCAAGAAAGTGTAATTAACACAAACAATGAGAATCAAGATAAGGCACATGCTCGGTTACAGAATGGTAGTGTAGACTCTTCTCAACATAAGGAGGTAATGGTAATGACTCTTGGAACAATGCCAAATGAACCTCAACAAACATGTCAACTAGTGAACACAGACATAACCTCCCAACGTGTTATTAGTAGTAATAATAACACATTATCAGAAGTAACCAAATCCTCATTAGGGCCTAAGATTCTTCTTGTTGAAGATAACAAAATCAATGTCATGGTGACACAGTCAATGATGAAGAGGTTAGGCTATAGCATGGATGTTGTGAATAATGGAGTGGAAGCCGTACGTGCAGTTCAGCACCATACTTATGATATCATATTGATGGATGTTTACATGCCAGTTATGAATGGTCTTCAAACAACAAAACTGATTCGGTCTTATGAGGACACGGGCAATTGGGAAGCTGCAAGAAAAGCTGGGATAGAACAATGTTTACCAGCTTCAAATGAATGTTCTGTACCACCTAAAAACCGGATCCACATCATTGCGATGACAGCAAACACAATGTCAGAGAGTGCTGAGGAATGTTATGCAAATGGTATGGACTCGTTTGTGTCAAAACCTGTGACATTCCAAAAATTGAAAGATTGTCTAGAACAGTACCTGAGGTGA 3039 0.4107 MVCEMESDCIEDMDIEVLSSMWPEDIGTDVGKQFNIEKPGRDQDMLEEVTIIEEPTIADFQRLMELTNYTDKGSSQLAYLMKHWEYKQANAVRLLREELDNLSKQRKEVELRKLEILKDTRFEEENYGGDKRPVSILDEVYYTWQDVPVPLRKSNIVVQTKRIEIDAEYDTVVYWKQRALQLERQLEASVQREQILMDKLEESVKNLERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQDFKREVMEKGLPAKKEITFETELFGSKTFLIYVEPVFSKAGETIGVNYMGMEITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLNVMISSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKMLTLEGNVADDMPIEVIGDVLRIRQILTNLVSNAVKFTHEGKVGINLYVVPEPPFAKAEGHQKMITEQSTNSANGVKEEKRASTPRSSSDQNCLDGQKHNDHPSQNHAFNDECRSSVKSECSMNGDTEEQTHSTETVWIRCDVYDTGIGIPEKAIPTLFRRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVTSKEHVGSTFTFILPYKVSTACDDSDDPDELSDVDDNDDDTTEGFFQFQPRTLGSLFTSNGPTRPQNILPGFRSSHKFNGISENSYSFLTTNTRSKGISSTEDASSVIVDAPEMSESTSSSSHSPETKQESVINTNNENQDKAHARLQNGSVDSSQHKEVMVMTLGTMPNEPQQTCQLVNTDITSQRVISSNNNTLSEVTKSSLGPKILLVEDNKINVMVTQSMMKRLGYSMDVVNNGVEAVRAVQHHTYDIILMDVYMPVMNGLQTTKLIRSYEDTGNWEAARKAGIEQCLPASNECSVPPKNRIHIIAMTANTMSESAEECYANGMDSFVSKPVTFQKLKDCLEQYLR* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0914 1012 MobiDBLite consensus disorder prediction 525 577 - -
Gso14g0914 1012 Gene3D - 863 1012 - -
Gso14g0914 1012 Coils Coil 92 119 - -
Gso14g0914 1012 SMART HisKA_10 373 438 IPR003661 GO:0000155|GO:0007165
Gso14g0914 1012 MobiDBLite consensus disorder prediction 685 736 - -
Gso14g0914 1012 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 678 IPR003594 -
Gso14g0914 1012 MobiDBLite consensus disorder prediction 687 704 - -
Gso14g0914 1012 SMART REC_2 868 1007 IPR001789 GO:0000160
Gso14g0914 1012 CDD HisKA 372 434 IPR003661 GO:0000155|GO:0007165
Gso14g0914 1012 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 5 1011 - -
Gso14g0914 1012 Gene3D PAS domain 214 350 - -
Gso14g0914 1012 Coils Coil 183 217 - -
Gso14g0914 1012 SUPERFAMILY CheY-like 868 1012 IPR011006 -
Gso14g0914 1012 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 372 438 IPR036097 GO:0000155|GO:0007165
Gso14g0914 1012 Gene3D - 439 684 IPR036890 -
Gso14g0914 1012 CDD REC_hyHK_CKI1_RcsC-like 870 1007 - -
Gso14g0914 1012 Pfam Response regulator receiver domain 870 938 IPR001789 GO:0000160
Gso14g0914 1012 Gene3D - 361 438 - -
Gso14g0914 1012 SMART HKATPase_4 484 680 IPR003594 -
Gso14g0914 1012 ProSiteProfiles Histidine kinase domain profile. 380 680 IPR005467 -
Gso14g0914 1012 Pfam His Kinase A (phospho-acceptor) domain 375 438 IPR003661 GO:0000155|GO:0007165
Gso14g0914 1012 CDD HATPase_EvgS-ArcB-TorS-like 489 677 - -
Gso14g0914 1012 MobiDBLite consensus disorder prediction 775 794 - -
Gso14g0914 1012 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 5 1011 - -
Gso14g0914 1012 MobiDBLite consensus disorder prediction 705 736 - -
Gso14g0914 1012 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 427 679 IPR036890 -
Gso14g0914 1012 ProSiteProfiles Response regulatory domain profile. 869 1011 IPR001789 GO:0000160
Gso14g0914 1012 Coils Coil 344 364 - -
Gso14g0914 1012 PRINTS Bacterial sensor protein C-terminal signature 605 619 IPR004358 GO:0016310|GO:0016772
Gso14g0914 1012 PRINTS Bacterial sensor protein C-terminal signature 640 658 IPR004358 GO:0016310|GO:0016772
Gso14g0914 1012 PRINTS Bacterial sensor protein C-terminal signature 664 677 IPR004358 GO:0016310|GO:0016772
Gso14g0914 1012 MobiDBLite consensus disorder prediction 529 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0914 Gso-Chr14 11206731 11214926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0914 1 1011 Histidine Kinase Gene Family AT5G10720 57.282 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso14g0914 HATPase_c 1.4e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0914 - - gmx:100796072 1954.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0914 14 11206731 11214926 Gso17g1871 17 37478524 37486462 GST