Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0911 ATGAGCGGAAAAGCCTCCGTCTCCAAGGAGCTCCATGCCAAGCACACCAAGATATTAGAGGGACTTGTTAAGCTACCTGACAACAGGGAATGTGCAGACTGCAGGACCAAGGCACCACGATGGGCAAGTGTGAACTTAGGGATATTCATTTGCATGCAATGTTCAGGAATTCACCGTAGTCTTGGAGTGCATATATCAAAGGTGCGGTCCACAACTTTGGATACATGGTTGCCAGATCAAGTTTCTTTTATGCAATTAATTGGTAATGCAAAGTCAAATAAGCACTGGGAGGCAGAATTACCGCCAAATTTTGACAGAAATGGATATGGAGTTGAGAAATTTATTCGTTCCAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGTGGACTACAGCCAGCTTCAAAGTCAGCTGAAATAATCTTTAACTCGAATGAATCACCAGCTGCTGGGGCCAAGAGTGCCACTCAGAGGAATAGGAGATTGTCTCTTGAGGAAAGCATTCTTGTGAAACATGTGGCACAAATTCGGCCTCCAGTCACGAGATATCATGAGGTATTCATGTTTAATGTCAAGTTCAATCCGTGA 585 0.4376 MSGKASVSKELHAKHTKILEGLVKLPDNRECADCRTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQLIGNAKSNKHWEAELPPNFDRNGYGVEKFIRSKYVEKRWASKGGLQPASKSAEIIFNSNESPAAGAKSATQRNRRLSLEESILVKHVAQIRPPVTRYHEVFMFNVKFNP* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0911 194 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Gso14g0911 194 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
Gso14g0911 194 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
Gso14g0911 194 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Gso14g0911 194 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Gso14g0911 194 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Gso14g0911 194 SMART arf_gap_3 5 132 IPR001164 GO:0005096
Gso14g0911 194 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 186 - -
Gso14g0911 194 CDD ArfGap 19 119 - -
Gso14g0911 194 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 137 IPR001164 GO:0005096
Gso14g0911 194 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 186 IPR044520 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0911 Gso-Chr14 11149382 11151474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0911 19 119 C2H2 Transcription Factor Family AT4G05330 48.598 1.89e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0911 K12486 - gmx:100816853 397.512