Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0898 ATGGAATACGTGGATACTTCACTCAATCTTAACGTTGATCCTTCTTCTATGCACATGGATGGAGTTTTGGTGGAAGAGTTGCGTCGTCTAAGTTGTGAGAACAAGAGGTTGACCGGGATGTTGACCCACTTGTGTGAGAACTACAAGGCTCTGCAAAAGCAACTGAGCCAATTGATCAACACGAATTTTGAGCAATTAGACCCAATTGAATCACGCAAGAGAAAAGCCGAGAGTGATCAATGGTGTACCAACAAATTTATTGGTGTTAATAATGCTGAATGCAGCTCCATCACCGAGGATTCATTCAGAAAGTACAAGGACTTCAACTCCTCCCCTAAGGTTTCCAAAGTTCTTGTCAAGACTGAAGCATCAAATAATAGCTTATATGTGATGGACGGATATCAATGGAGGAAATATGGTCAGAAGGTCACTAGGGATAACCCTTCTCCTAGGGCTTACTTCAGGTGCTCCTCTGCCCCAAGTTGCCCCGTGAAAAAGAAGGTGCAAAGGAGTTTAGAGGACCCTACAATACTTGTTACAACGTATGAAGGAGAGCATAACCATGGTCATCAAAGAGCTGAAATATCACTTGTCTCAAACCAAAGAGAAGCCCCTCCAAAAGGGTCAAGTCCTGTTTCCTCACCTACACCCACAATTCGAAGTGCTGCTTGCCCCACCGTAACGTTTGATTTGGTCAAGTCAGGTTTGGTTGAACTTGAAAGTGCCCAAAAGTCATCTATCCAGCAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAGGGATACCAATTTCACAACAGCACTTGCCACTGCCATTTCAGGAAAAATTCTAGAGGCCCAATGGTGA 849 0.4346 MEYVDTSLNLNVDPSSMHMDGVLVEELRRLSCENKRLTGMLTHLCENYKALQKQLSQLINTNFEQLDPIESRKRKAESDQWCTNKFIGVNNAECSSITEDSFRKYKDFNSSPKVSKVLVKTEASNNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSSAPSCPVKKKVQRSLEDPTILVTTYEGEHNHGHQRAEISLVSNQREAPPKGSSPVSSPTPTIRSAACPTVTFDLVKSGLVELESAQKSSIQQFLVQQMATSLTRDTNFTTALATAISGKILEAQW* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0898 282 SMART WRKY_cls 130 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0898 282 ProSiteProfiles WRKY domain profile. 125 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0898 282 Gene3D WRKY domain 113 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0898 282 Coils Coil 41 61 - -
Gso14g0898 282 MobiDBLite consensus disorder prediction 200 219 - -
Gso14g0898 282 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 4 279 - -
Gso14g0898 282 SUPERFAMILY WRKY DNA-binding domain 128 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0898 282 Pfam WRKY DNA -binding domain 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0898 282 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 4 279 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0898 Gso-Chr14 10694668 10696489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0898 4 279 WRKY Transcription Factor Family AT1G80840 45.548 2.79e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g0898 WRKY 4.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0898 - - gmx:100810978 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0898 14 10694668 10696489 Gso17g1882 17 37692981 37694757 GST