Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0896 ATGGTCGTTCAACTCTTCAACACGGCAATCATAATGGATGAAAAGGTGGAAACTCTTAAAGCTGAGTTACAACGAGTGAGAGAGGAGAACAACACTCTAAGACTGATGCTTGAAGTTCTAAACAGCAAGTGCACAAAGCTTGAGATCCATCTTCAAGAGATAAACAAGGCACAACACAAGGGCATGAGTTCAAATCAAATAGGGTCAGTAACAGTACCACCTATGTTTGATACAAACAAGAGACCGAGACTAGAGCTTCCCACAGCAAAAAAGCCATTACAAATCTTTGTCAGAACACACCCCAAGGATGATAGTTTGATAGTAAAAGATGGCTATCAGTGGAGGAAGTATGGGCAGAAGGTTACCAAAGACAATGCTTCACCAAGAGCTTATTTCAGGTGCTCCATGGCTCCCATGTGCCCAGTCAAAAAGAAGGTGCAAAGATGCTTACATGATAAGTCAATCGTTGTTGCAACTTATGATGGAGAGCACAACCATGCGGCCATTCATGAGTCATCTTCATCCACATCTAAAGGCTCATCACCAGTGGTTAATAACTTACCTCTGATGACAAGCATATTAAATGACAAAGAACCCATGAACATTGGCTTGGCTCTTTCAGGGTGGTCTCAAACAGATCATAGGAGACATTGTGAAGATGCCATGCAACAGAATAATAATAATGGTGGTAGCAACATCAGAATTGAAGAATATGTAAGTTCTCTAATAAAAAATCCTGACTTCTCCATGTCATTAGCTGAAGCAGTTGTCCGCACCATCACTGGCCAGCAAAAGCAACAAGATATAAACCTTAATTTGGATCTTCCTGAAGAGTGA 837 0.411 MVVQLFNTAIIMDEKVETLKAELQRVREENNTLRLMLEVLNSKCTKLEIHLQEINKAQHKGMSSNQIGSVTVPPMFDTNKRPRLELPTAKKPLQIFVRTHPKDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPMCPVKKKVQRCLHDKSIVVATYDGEHNHAAIHESSSSTSKGSSPVVNNLPLMTSILNDKEPMNIGLALSGWSQTDHRRHCEDAMQQNNNNGGSNIRIEEYVSSLIKNPDFSMSLAEAVVRTITGQQKQQDINLNLDLPEE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0896 278 Pfam WRKY DNA -binding domain 109 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0896 278 Gene3D WRKY domain 94 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0896 278 ProSiteProfiles WRKY domain profile. 103 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0896 278 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 260 IPR044810 GO:0003700
Gso14g0896 278 SUPERFAMILY WRKY DNA-binding domain 104 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g0896 278 SMART WRKY_cls 108 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g0896 278 Coils Coil 9 57 - -
Gso14g0896 278 PANTHER WRKY TRANSCRIPTION FACTOR 49 12 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0896 Gso-Chr14 10618324 10621002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0896 13 268 WRKY Transcription Factor Family AT1G80840 32.993 6.49e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g0896 WRKY 2.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0896 - - gmx:100791870 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0896 14 10618324 10621002 Gso17g1884 17 37720213 37722527 GST
Gso14g0896 14 10618324 10621002 Gso4g0523 4 4977891 4979586 PCT
Gso14g0896 14 10618324 10621002 Gso6g0518 6 4719582 4721390 PCT
Gso4g0523 4 4977891 4979586 Gso14g0896 14 10618324 10621002 PCT
Gso6g0518 6 4719582 4721390 Gso14g0896 14 10618324 10621002 PCT