Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0892 ATGGCTGAATTCACAGAAAATTTGCAAAGAATTGGACCCTCCTCATTTCCATTCTTGGACATTGATCCAAGCATGGAACTCCTAAACCAATTCATAGGGATGAACCAATTATATGTTCTAGACAACTCAAACTTGATGCCTTATTTCTCCTTTGACACCTTCTTATTGGGCCCCCAAGAACCTGAGTTTCCAGGAAACTTGGAAGAAGATTTTCCTTTTCTCTTCAATCATGTCAACCACAATAATGCACTTCCTATTTCCCTCCCCATTTTCCAAGCAGAAAATGAGATCCATGAAGGTAAAAAGAGGAAATCAATGGATCTTCCTGAGACCAGTTCAGTAAACTCAACTCCTAAAGTTTCTGAGAGTGGAAACAATTCTGGAAGAGGAAAGAGAGTGAAAAACAATGTAACAGAAGAGGAGAAGGCAAAGGAAGTGGTTAATGTCAGGGCTAGAAGTGGTCAAGCTACCGATAGTCGCAATTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAATTGAGGTACTTACAGAATATTGTTCCAGGGTGTTACAAGACAATGGGTATGGCAGTAATGTTGGATGAAATCATAAACTATGCGCAGTCCTTGCAGCATCAAGTAGAGTTCCTTTCTTTGAAGCTTACTGCACCAAGTACCTTTTATGGCTTCAATTCCGAGATAGATGCTTTGGAAACAATGCAGAGAGCAAGGGCATCCGAGGCAAAAGAGTTAGGCATGTATAAGAGAGAAGGGTATGGAGGGGTTTCTTTCTTTCAACAAACATGGCACCTTTGA 801 0.4057 MAEFTENLQRIGPSSFPFLDIDPSMELLNQFIGMNQLYVLDNSNLMPYFSFDTFLLGPQEPEFPGNLEEDFPFLFNHVNHNNALPISLPIFQAENEIHEGKKRKSMDLPETSSVNSTPKVSESGNNSGRGKRVKNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYAQSLQHQVEFLSLKLTAPSTFYGFNSEIDALETMQRARASEAKELGMYKREGYGGVSFFQQTWHL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0892 266 MobiDBLite consensus disorder prediction 100 159 - -
Gso14g0892 266 SMART finulus 161 211 IPR011598 GO:0046983
Gso14g0892 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 205 IPR011598 GO:0046983
Gso14g0892 266 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 265 IPR024097 GO:0006355
Gso14g0892 266 MobiDBLite consensus disorder prediction 109 132 - -
Gso14g0892 266 Gene3D - 151 213 IPR036638 GO:0046983
Gso14g0892 266 PANTHER TRANSCRIPTION FACTOR BEE 1 2 265 - -
Gso14g0892 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 221 IPR036638 GO:0046983
Gso14g0892 266 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0892 Gso-Chr14 10458733 10460519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0892 63 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 48.117 1.26e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso14g0892 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0892 - - gmx:100807773 506.523