Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0886 ATGGGAACAACTCTCAGCACTCCCAAAACTGAAAAGTCTTCCGATGATGGTGAAAATGAGCATCTTAGATATGGTTTATCATCTATGCAAGGCTGGCGTGCAACAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCATCCACTTCCTTCTTTGGTGTTTATGATGGTCATGGAGGTAAAGTGGTTGCAAAGTTTTGTGCTAAGTATCTTCACCAGCAGGTGCTCAAGAATGAAGCATACATAGCTGGAGATATAGGAACCTCTCTTCAGGAATCATTTTTCAGAATGGACGAGATGATGCGTGGTCAAAGGGGGTGGAGGGAATTAGCAGTTTTGGGTGATAAGATAAACAAGTTTAATGGTAAGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGAGATATTAAGGAGCAAGATGATGCTTGGGCTTTTGAGGAGGGTCCTCATTCTAATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAATTATTAGAAACAGCAAACTTTTTGTAGCTAATGCCGGTGATTCACGTTGTGTGATATGTAGGAAGGGTCAGGCGTATGATTTGTCTATAGATCATAAACCTGATATTGAGATTGAGAAGGAAAGAATCATAAAAGCTGGTGGGTTTATTCATGCCGGAAGAGTTAATGGGAGTTTAAGCCTTGCAAGAGCAATAGGTGACATGGAATTTAAGCAGAATAGGTTCCTTTCTGCTGAAAAGCAAATGGTGACAGCCAATCCAGACATCAATACTGTTGAACTTTGTGATGAAGATGAATTTATAGTGCTGGCTTGTGATGGCATATGGGATTGCTTGTCAAGCCAACAATTGGTAGATTTTGTACGTCAACAACTGCTCTTGGAAAGTAAACTTTCTGCGGTTTGTGAAAGAGTACTAGATCGATGTTTGGCACCTACAATAACTGTTGGTGATGGATGTGATAACATGACCATGATTTTGGTGCAATTCAAAAAGCTGGCTCAAACAAGTGCACCAGCATAA 1020 0.4127 MGTTLSTPKTEKSSDDGENEHLRYGLSSMQGWRATMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKNEAYIAGDIGTSLQESFFRMDEMMRGQRGWRELAVLGDKINKFNGKIEGLIWSPRSRDIKEQDDAWAFEEGPHSNFAGPTSGSTACVAIIRNSKLFVANAGDSRCVICRKGQAYDLSIDHKPDIEIEKERIIKAGGFIHAGRVNGSLSLARAIGDMEFKQNRFLSAEKQMVTANPDINTVELCDEDEFIVLACDGIWDCLSSQQLVDFVRQQLLLESKLSAVCERVLDRCLAPTITVGDGCDNMTMILVQFKKLAQTSAPA* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0886 339 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 335 - -
Gso14g0886 339 SMART PP2C_SIG_2 28 329 IPR001932 -
Gso14g0886 339 MobiDBLite consensus disorder prediction 1 20 - -
Gso14g0886 339 PANTHER PROTEIN PHOSPHATASE 2C 1 335 IPR015655 GO:0004722|GO:0006470
Gso14g0886 339 CDD PP2Cc 23 329 IPR001932 -
Gso14g0886 339 Pfam Protein phosphatase 2C 153 312 IPR001932 -
Gso14g0886 339 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Gso14g0886 339 Gene3D - 1 330 IPR036457 -
Gso14g0886 339 SMART PP2C_4 13 327 IPR001932 -
Gso14g0886 339 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Gso14g0886 339 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Gso14g0886 339 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0886 Gso-Chr14 10396805 10402613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0886 1 331 PP2C-type Phosphatase Gene Family AT2G25070 76.435 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0886 K17499 - gmx:100787633 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0886 14 10396805 10402613 Gso14g0886 14 10396805 10402613 ECH
Gso14g0886 14 10396805 10402613 Gso17g1894 17 37860233 37866009 GST
Gso14g0886 14 10396805 10402613 Gso4g0514 4 4910158 4916340 PCT
Gso14g0886 14 10396805 10402613 Gso6g0508 6 4649763 4655844 PCT
Gso4g0514 4 4910158 4916340 Gso14g0886 14 10396805 10402613 PCT
Gso6g0508 6 4649763 4655844 Gso14g0886 14 10396805 10402613 PCT