Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0882 ATGTTGGCAACCTTGGAATACTTCCACTGCTTCAAAACATCTCTTCTTTTGCTAATCTTTATGATCCTTCCAATAGTTCAACCACTCTCCTTCAACATAACTAACTTTAGCGACCCTGAGAGCGCAAGCCTCATCAAAAATGAAGGCATAGCGAAAATTGAGAATGGAACCATTGTGCTCAATTCACTTATCAATAGTGGAGTTGGACGAGCCATCTATAGCGAACCTCTAAGTCTGAAAAATGATTCTAACGGCAATGTCACAGACTTTTCAACTCGTTTTTCATTCACTATCAAAGTGCTCAATAAAACCAACTACGGTGATGGCTTCGCCTTCTACATCGCACCCCTTGCTTTTGACTACCAAATTCCCCCCAATTCATCTGGTTTCCTTCTCGGCCTATACGGTGACACCCAAAATAACCTTGTTGCTGTCGAATTTGACACTTATGTAAACGAGTTTGACCCACCAATGAAGCACGTAGGGATCAACAATAACTCTGTTGCATCCCTTGATTATAAGAAGTTTGATATTGATAGCAACATAGGGAAGATGGGGCATACGTTGATAACTTACAACGCTTCTGCCAAACTCCTTGCTGTCTCATGGCTCTTTGATGGAACTAGTTCTGGTTTTACGCCTAACAATTCTCTCTCACACCAGATTGACCTTGGGGAAATTCTACCAAAGTGGGTCACGGTTGGGTTTTCGGGTGCAACCGGGTCGTCCAAAGAGGAAAATGTTATCCATTCCTGGGAATTCAGTCCAAATCTAGATCTTAATTCCACAAATCCAGAGGCAAACAACGAAAATGTCATCATAATTACCAAATACAAGGTTCAGGTCAAAGTAGTAGTTGTTGCAGTGATTTGTTCTATTATTGTTGTGCTGGTGGTTGTGAGTATTAGTTGGTTGATCATCAAGAAGAGAAGAACCAAGGATGATTTTCATTTGGATAAAGAGCCTAGAAGGTTTGCTTATAACGAATTAGTTGCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTCGGAGAAGGAGGCACTGGAGAAGTTTACAAAGGGTTTCTGAGTGATTTAGGGCGCGAGGTTGCAGTGAAAAGGATTTTTTCTGATGTTGAAGATTCCGAGGAAATATTTACAAACGAGGTGAAGATTATAAGTCGTCTTATACATAGAAACCTTGTGCAGTTAATGGGATGGTGCCACGAGCAAGGGAAGTTATTACTGGTTTTTGAATACATGGTTAATGGAAGCCTTGACACTCATCTATTTGGCAGCAGAAGAACATTGACATGGGGTGTGAGATACAACATAGCGTTAGGTATGGCCAGAGCTCTTCGATATCTTCATGAAGACGCGGTGCAGTGTGTTCTTCATAGAGATATTAAGTCAGGTAATGTTTTGTTGGATACTGATTTCAATATTAAGGTTAGTGACTTTGGGATGGCCAAATTGGTGGATCCAAGATTAAGGACTCAGAAGACAAAGCTGGAGGGGACATATGGGTACCTGGCTCCGGAATATGTAAAGGAAGGAAGGGTTAGCAAGGAATCTGACATGTACGGTTTTGGGGTTGTTGTGTTGGAGATAGCATGTGGAAGGAAGACTTACCAGGATGGGGAGCATAATCATGTGCCTTTGGTGAATTGGGTGTGGAAACATTATGTGGAAGAGAATATTTTGAATGTTGCTGATAAGGGATTGAACATGGGTTTTGATGTGGATGAAATGACATGCTTGCTCACTGTGGGACTATGGTGTACCCTCCAAGACTACAAGAAAAGGCCAAAGGCAGAACAGGTTATTAATGTTCTTAAGCAAGAAGTTCCGCTGCCAAAGCTTTCTACATGA 1851 0.4176 MLATLEYFHCFKTSLLLLIFMILPIVQPLSFNITNFSDPESASLIKNEGIAKIENGTIVLNSLINSGVGRAIYSEPLSLKNDSNGNVTDFSTRFSFTIKVLNKTNYGDGFAFYIAPLAFDYQIPPNSSGFLLGLYGDTQNNLVAVEFDTYVNEFDPPMKHVGINNNSVASLDYKKFDIDSNIGKMGHTLITYNASAKLLAVSWLFDGTSSGFTPNNSLSHQIDLGEILPKWVTVGFSGATGSSKEENVIHSWEFSPNLDLNSTNPEANNENVIIITKYKVQVKVVVVAVICSIIVVLVVVSISWLIIKKRRTKDDFHLDKEPRRFAYNELVAATNGFADDRRLGEGGTGEVYKGFLSDLGREVAVKRIFSDVEDSEEIFTNEVKIISRLIHRNLVQLMGWCHEQGKLLLVFEYMVNGSLDTHLFGSRRTLTWGVRYNIALGMARALRYLHEDAVQCVLHRDIKSGNVLLDTDFNIKVSDFGMAKLVDPRLRTQKTKLEGTYGYLAPEYVKEGRVSKESDMYGFGVVVLEIACGRKTYQDGEHNHVPLVNWVWKHYVEENILNVADKGLNMGFDVDEMTCLLTVGLWCTLQDYKKRPKAEQVINVLKQEVPLPKLST* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0882 616 CDD lectin_legume_LecRK_Arcelin_ConA 29 258 IPR001220 GO:0030246
Gso14g0882 616 Pfam Protein kinase domain 338 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0882 616 Gene3D Phosphorylase Kinase; domain 1 307 413 - -
Gso14g0882 616 ProSiteProfiles Protein kinase domain profile. 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0882 616 SUPERFAMILY Protein kinase-like (PK-like) 320 605 IPR011009 -
Gso14g0882 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Gso14g0882 616 Gene3D Transferase(Phosphotransferase) domain 1 414 615 - -
Gso14g0882 616 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Gso14g0882 616 PANTHER LECTIN RECEPTOR KINASE 28 615 - -
Gso14g0882 616 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Gso14g0882 616 PANTHER - 28 615 - -
Gso14g0882 616 Gene3D - 27 283 - -
Gso14g0882 616 SMART serkin_6 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0882 616 Pfam Legume lectin domain 29 264 IPR001220 GO:0030246
Gso14g0882 616 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 264 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0882 Gso-Chr14 10257767 10260013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0882 14 616 Receptor kinase-like Gene Family AT5G10530 42.880 9.80e-162 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso14g0882 Pkinase 2.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0882 - - gmx:100801935 1180.62