Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0881 ATGGTGCTCACAATTTTTCTTCTCGTGTTGGCCATTCCTTCTCTTAAAACAGCCGAATCACTAAGTTTCAACATAACAAACTTCCACGACCCCGACAGTGCAAAAAACATGGCATACCAGGGTGATGGCAAAGTAAACAAGAACGGGTCCATAGAGCTCAACATAGTGACCTATATTTCCCGCGTTGGGAGAGCCTTTTACGGACAACCTTTGCACCTGTGGGACTCATCTTCTGATGTTCTAACCAACTTCTCTACGCGCTTCACTTTCACTATTGAAAGAGCCACCAACGACACCATCGGTGACGGTTTTGCCTTCTACTTAGCCCCTCTTGGTTACCAAATTCCTGCAAACGCAGTCGGTGGCACTTTAGGCCTTTTCAACGCCACCACCAATACCTACATTCCCCATAACCACGTTGTCGCTGTTGAGTTTGACACATTTAACGGCACAATTGACCCTCCCTTTCAGCACGTTGGCATAGATGATAACTCTCTCAAATCCGTGGCCGTTGCTGAGTTTGACATTTACAAAAACCTTGGAAAGGAATGTAACGCTTTGATAACCTACACTGCTTCCACTAAGACCCTCTTTGTGTCTTGGTCTTTTAACGAAACCGCAACACCCCGTTCCAATTCTTCACTTTCTTACAAGATTGATCTCATGGACATTCTACCCGAGTGGGTGGTTGTTGGATTCTCCGCTGCAACTGGCCAATATACTGAACGAAACATTATTCACTCGTGGGAGTTCAGTTCAACGTTGAATTCTTTCACTGCTTCGAGGCATGGGAACGAAAAACACAATGTTTTGCTGATTGTTGTGGTAACCTGCTCAACGGTCTTGGTGGTTGTGGCCGCGAGTTTTGCAGCTTGGGTAACGATCACAAAAAGGAGAAAGGGTAAGGTTGATAATGATAATGATGAACTTGGAGCCACCCCGGTTATGTTTGATTTGGATAGGGCAACTATACCTAGAAGAATTGATTACAAAGAACTAGTTGCAGCTACCAAAGGGTTCGCGGCTGATGCAAGGCTTGGACGAGGTAGCTCGGGACAGGTGTACAAAGGGGTTCTGAGTAATTTAGGAAGGGTTGTTGCAGTCAAAAGGATTTTCACTAACTCTGAAAATTCAGAGAGAGTTTTCATCAATGAGGTTAGGATCATAAGTCGTCTAATACATAGAAACTTGGTCCAGTTCATAGGGTGGTGTCACGAGCAAGGAGAGTTTCTGTTGGTTTTTGAGTTCATGCCTAATGGAAGCCTTGACACCCATCTCTTTGGGGAGAAAAGATCTTTGGCATGGGATATTAGGTACAAGGTAGCATTAGGGGTGGCTTTGGCCCTTCGTTATCTTCATGAGGATGCGGAGCAGAGTGTTCTTCATAGGGATATTAAGTCAGCTAATGTGTTGTTGGACACGGATTTTAGCACCAAGCTTGGCGATTTTGGGATGGCTAAGTTGGTGGATCCAAGGTTGAGGACTCAAAGGACAGGGCTGGTGGGGACTTATGGGTACCTTGCCCCAGAATATATCAACCATGGTAGGGCTAGTAAGGAATCAGACATTTACAGTTTTGGGGTTGTAGCTCTTGAAATTGCATGTGGGAGGAGGACTTATCAAAACGGGGAGTTTCATGTACCTCTCGTGAACTGGGTGTGGCAAAAATATGTGGAAGGGAATGTTCTGGATGTTGTAGATGAGAGATTAAACAAGGAGTATGATGTGGATGAAATAACAAGCTTGATTGTTGTGGGGTTGTGGTGTACTAACCCAAACGACAGGGAAAGACCCAGGGCTGCACAGGTAATAAAAGTTCTTCAGCTTGAAGCGTCGTCATTGCCTGTGCTTCCATTTGATATGCATGACGGTCCTCCTCCTCCTTCTCCAGTTACCCATGCACAATCCTCTTACAATTCCGCACGTTCAGTACCCTTCACTAATAGCTTTGTCAATGTCGGACGCTAA 1968 0.4522 MVLTIFLLVLAIPSLKTAESLSFNITNFHDPDSAKNMAYQGDGKVNKNGSIELNIVTYISRVGRAFYGQPLHLWDSSSDVLTNFSTRFTFTIERATNDTIGDGFAFYLAPLGYQIPANAVGGTLGLFNATTNTYIPHNHVVAVEFDTFNGTIDPPFQHVGIDDNSLKSVAVAEFDIYKNLGKECNALITYTASTKTLFVSWSFNETATPRSNSSLSYKIDLMDILPEWVVVGFSAATGQYTERNIIHSWEFSSTLNSFTASRHGNEKHNVLLIVVVTCSTVLVVVAASFAAWVTITKRRKGKVDNDNDELGATPVMFDLDRATIPRRIDYKELVAATKGFAADARLGRGSSGQVYKGVLSNLGRVVAVKRIFTNSENSERVFINEVRIISRLIHRNLVQFIGWCHEQGEFLLVFEFMPNGSLDTHLFGEKRSLAWDIRYKVALGVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLRTQRTGLVGTYGYLAPEYINHGRASKESDIYSFGVVALEIACGRRTYQNGEFHVPLVNWVWQKYVEGNVLDVVDERLNKEYDVDEITSLIVVGLWCTNPNDRERPRAAQVIKVLQLEASSLPVLPFDMHDGPPPPSPVTHAQSSYNSARSVPFTNSFVNVGR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0881 655 Pfam Legume lectin domain 20 256 IPR001220 GO:0030246
Gso14g0881 655 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Gso14g0881 655 Gene3D - 18 268 - -
Gso14g0881 655 ProSiteProfiles Protein kinase domain profile. 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0881 655 CDD lectin_legume_LecRK_Arcelin_ConA 21 255 IPR001220 GO:0030246
Gso14g0881 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Gso14g0881 655 SUPERFAMILY Protein kinase-like (PK-like) 324 640 IPR011009 -
Gso14g0881 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 255 IPR013320 -
Gso14g0881 655 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Gso14g0881 655 Gene3D Transferase(Phosphotransferase) domain 1 417 616 - -
Gso14g0881 655 SMART serkin_6 340 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0881 655 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Gso14g0881 655 PANTHER LECTIN RECEPTOR KINASE 20 622 - -
Gso14g0881 655 Pfam Protein kinase domain 343 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0881 655 PANTHER - 20 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0881 Gso-Chr14 10254293 10257088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0881 3 621 Receptor kinase-like Gene Family AT5G10530 44.374 2.39e-171 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso14g0881 Pkinase 4.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0881 - - gmx:102662919 1293.87