Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0879 ATGTTGCCTACCCCTGCATGTTTTCACTACTTCAGAAATTCTCTTCTTTTGTGCTTCCTTATGATCCTTCCAATAGTTCAACCACTTTACTTCAACATAACAAGCTTTAACGACACTGAAAGCGCAAGCCTCATTGGATATGCAGGCATTGCCAAGACTGAGAACGGAACCTTAGTGCTCAACCCACTCATCAACAATGGAGTTGGACGAGCCATCTATGGCAAACCTCTGCGCCTCAAAAACTCTTCTAATGGACATGTCACTGACTTTTCCACTTGGTTTTCATTCACTATCGATGTGTCCACTAGAACCAACTATGGTGACGGCTTTGCCTTCTTTGTGGCACCCCTTGCCTACCAAATTCCGCCCAATTCAGGTGGTGGCAGTCTTGGCCAATGCGATGACAGCAAACCCCAAAATAACATCATTGCTGTTGAATTTGATACTTTTGTTAATAATTTTGATCCAACAATGCAGCATGTGGGGATCAACAATAACTCTTTGGTATCTCTCAATTATAGCAGGTTCAATATTGAGAGCAACATAGGGAAGATGGGGCATGCGTTGATAACTTACAATGCTTCTTCCAAACTCCTTGTTGCCTCATGGTTCTTCGAGGGAACTACTTCTGGTTTTATGCCCAAAACTTCTGTTTCATACCAGATTGACCTAGGGGAAATTCTACCAGAGTGGGTCACTGTTGGGTTTTCAGGTGCAACCGGGTTGTCCAATGAGGAAAATGTTATTCATTCCTGGGAATTCACTTCAACTATGAATTCCACGCGTTCAGATGTAAACAAAGAAAGTTACATCATAACCAAATACAAGTTTCAAGTCAAAGTAGTAGTTGTTGAAGTTACTTGTTCTATTCTTTTTGTTCTCGTGGTCATTGGTGTTTCTTGGTTGATCGTCATCAAGAAAAGAAGAAGTGGGGATGGTTTTGATTTGGACAAAGCATCTATGCCGAGAAGATATTGTTATAACGAATTAATTGCAGCCACCAATGGGTTTGCAGATGATAGAAGGCTGGGAGAAGGAGGCTATGGACAAGTCTACAAAGGGTTTCTGACAGATTTAGGGCGCGTGGTTGCGGTGAAAAGGATCTTTTCTGATGTTGAAGATTCTGAGGAAATATTTACGAATGAGGTGAAGATTATAAGTTGCCTAATACATAGAAACCTTGTGCAATTCATAGGATGGTGCCAGGAACAAGGGGAGTTATTACTGGTTTTCGAGTACATGACTAATGGAAGCCTTGACACTCATCTATTTGGAAGTAGAAGAACTTTGACATGGGATGTTAGATACAAGATAGCGTTAGGTGTGGCCAGAGCACTTCAGTATCTTCATGAAGACGCAGAGCAGTGTGTTCTTCATAGGGATATTAAGTCAGGTAATGTTTTGTTAGACACTGCTTTCAATACTAAGGTTAGTGACTTTGGGATGGCGAAGTTGGTGGATCCAAGATTGAGGACTCAGAAGACAAGGGTGGTGGGGACATATGGGTACCTTGCCCCAGAATATGTAAAGGAAGGAAGGGCTAGCAAAGAATCAGACATGTACGGTTTCGGGGTTGTGGCTTTGGAGATAGCATGTGGAAGGAGGACTTACAAGGATGGGGAGTATAACCACGTGCCTTTGACAAATTGGGTGTGGAAACAATATGTGGATGGTAATGTTTTGAATGCTGTTGATGAGGGACTAAAAAGAGATTATGATGTGAATGAAATGAAATGCTTGCTCACTGTAGGACTATGGTGTACCCTGCAAGACCACAAGAAAAGGCCAAAGGCAGAACAGGTTATTAATGTTCTTAAGCAAGAAGCTTCATTGCCAAATCTTTTTACAGACATGCGTGCTTGA 1863 0.4192 MLPTPACFHYFRNSLLLCFLMILPIVQPLYFNITSFNDTESASLIGYAGIAKTENGTLVLNPLINNGVGRAIYGKPLRLKNSSNGHVTDFSTWFSFTIDVSTRTNYGDGFAFFVAPLAYQIPPNSGGGSLGQCDDSKPQNNIIAVEFDTFVNNFDPTMQHVGINNNSLVSLNYSRFNIESNIGKMGHALITYNASSKLLVASWFFEGTTSGFMPKTSVSYQIDLGEILPEWVTVGFSGATGLSNEENVIHSWEFTSTMNSTRSDVNKESYIITKYKFQVKVVVVEVTCSILFVLVVIGVSWLIVIKKRRSGDGFDLDKASMPRRYCYNELIAATNGFADDRRLGEGGYGQVYKGFLTDLGRVVAVKRIFSDVEDSEEIFTNEVKIISCLIHRNLVQFIGWCQEQGELLLVFEYMTNGSLDTHLFGSRRTLTWDVRYKIALGVARALQYLHEDAEQCVLHRDIKSGNVLLDTAFNTKVSDFGMAKLVDPRLRTQKTRVVGTYGYLAPEYVKEGRASKESDMYGFGVVALEIACGRRTYKDGEYNHVPLTNWVWKQYVDGNVLNAVDEGLKRDYDVNEMKCLLTVGLWCTLQDHKKRPKAEQVINVLKQEASLPNLFTDMRA* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0879 620 ProSitePatterns Legume lectins alpha-chain signature. 228 237 IPR000985 -
Gso14g0879 620 Gene3D Phosphorylase Kinase; domain 1 322 413 - -
Gso14g0879 620 CDD lectin_legume_LecRK_Arcelin_ConA 29 258 IPR001220 GO:0030246
Gso14g0879 620 Pfam Protein kinase domain 338 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0879 620 ProSiteProfiles Protein kinase domain profile. 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0879 620 Gene3D - 27 281 - -
Gso14g0879 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Gso14g0879 620 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Gso14g0879 620 Gene3D Transferase(Phosphotransferase) domain 1 414 619 - -
Gso14g0879 620 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 264 IPR013320 -
Gso14g0879 620 Pfam Legume lectin domain 30 265 IPR001220 GO:0030246
Gso14g0879 620 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Gso14g0879 620 SUPERFAMILY Protein kinase-like (PK-like) 321 605 IPR011009 -
Gso14g0879 620 SMART serkin_6 337 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0879 620 PANTHER LECTIN RECEPTOR KINASE 35 619 - -
Gso14g0879 620 PANTHER - 35 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0879 Gso-Chr14 10183611 10190311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0879 15 618 Receptor kinase-like Gene Family AT5G10530 44.286 3.36e-168 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso14g0879 Pkinase 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0879 - - gmx:100800327 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0879 14 10183611 10190311 Gso17g1900 17 37917629 37919842 GST