Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0870 ATGAGTTTCAAGAACAGCCCTAAAATTCAGCACAAGGGAGCCTCTCCATGCCTGTCTCGCCAATCATCCACTTCTAGTTTTAGGGCTAAGCCGCAGAAGAATGTGGAGCCACCAAGCCCTTTACCTGTTGGATGCTGCAGAGGCTTCAGCAATGCCAAGACTATGGGTTCCTCTGCCTCCACATCACACCAAAATATGCACCAGTTACAGTACCAAAAGCTGGAATTAAAGGTGGCAGATTTGGAAAAGGAAGTGCAAAAGCAAACAGAGCTAGGAGTGATGTACAGGAAAAGAATGGAAAGGACCCAAGACTACTTGAGGTACTGCCTTCAGATAGCACAAGCAAATGGAATATTAGATCTCATTGTGAACTGCAAAGGTGAATTTCAACAATCTCCGGTCTCTGTCCCCACCATCAGCTCCATTACCAGCCCTCAAATTCATATTCCCACTCCACCAAACCATGGCCACCACCCCAATCTAGCAGCCATTATTGATCAAGCTAAAATCAATGGATGGTATATTGATCCAAATGAGATTCAATTGGAAGAGAAAATCGGGCAGGGAAGCACCGCAGAGATTCACAGAGGAACATGGCGTGGATTTGAGGTAGCAGTGAAGTGCATATCCGAAGACTTCTTCCGCACAAACCAAAACGGCGTCGCATACTTTTCCCAGGAGCTCGAAACCCTATCGCGGCAGCGGCACAGGTTTGTGCTTCATCTCATGGGCGCGTGCATCCACCCTCCCCGGCGCGCGTGGGTGGTCACGGAGCATCTCAGCACCACACTGAAGGAGTGGCTGCACGGGCCCGGGACCAGGCGCAGGGAGCGAATGGTGCCACTTCCACCTTTCAAAGACAGAGTCATTAGGGCCCTTGAAATAGCCCAAGCCATGCAGTATCTGCACGAGCAAAAGCCCAAACTTGTTCACCGTGACTTGAAGCCCAGCAACATTTTTCTAGATGATGCCATGCATGTTAGAGTTGCTGATTTTGGTCACGCACGCTTCTTGGGTGATGAGGAAATGGCCCTCACTGGAGAAACGGGAACATACGTGTATATGGCACCAGAGGTGATCCGATGTGAACCTTATAATGAAAAGTGTGATGTGTACAGTTTTGGGATTATATTGAACGAGCTTTTAACTGGAAATTATCCATACGTTGAGACGGAATATGGTCCCACCAAGATTGCCATGGAAGTTGTGGAGGGTAAGCTGCGACCTAAGCTTCCGTGTGATGATGTTGGCCAACTGGGAGAGCTTATTGACCTTATATGCCTTTGCTGGGACAAAAATCCATCTACTCGCCCATCCTTCGCTACAATCACCCTTTGCCTCAAAAGTTATGTCAAGAAGAATCTCCTTTAA 1371 0.4821 MSFKNSPKIQHKGASPCLSRQSSTSSFRAKPQKNVEPPSPLPVGCCRGFSNAKTMGSSASTSHQNMHQLQYQKLELKVADLEKEVQKQTELGVMYRKRMERTQDYLRYCLQIAQANGILDLIVNCKGEFQQSPVSVPTISSITSPQIHIPTPPNHGHHPNLAAIIDQAKINGWYIDPNEIQLEEKIGQGSTAEIHRGTWRGFEVAVKCISEDFFRTNQNGVAYFSQELETLSRQRHRFVLHLMGACIHPPRRAWVVTEHLSTTLKEWLHGPGTRRRERMVPLPPFKDRVIRALEIAQAMQYLHEQKPKLVHRDLKPSNIFLDDAMHVRVADFGHARFLGDEEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLTGNYPYVETEYGPTKIAMEVVEGKLRPKLPCDDVGQLGELIDLICLCWDKNPSTRPSFATITLCLKSYVKKNLL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0870 456 MobiDBLite consensus disorder prediction 1 42 - -
Gso14g0870 456 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 36 453 - -
Gso14g0870 456 ProSiteProfiles Protein kinase domain profile. 180 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0870 456 Gene3D Phosphorylase Kinase; domain 1 168 260 - -
Gso14g0870 456 CDD STKc_MAP3K-like 186 444 - -
Gso14g0870 456 SUPERFAMILY Protein kinase-like (PK-like) 152 443 IPR011009 -
Gso14g0870 456 SMART serkin_6 180 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0870 456 Pfam Protein kinase domain 181 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0870 456 ProSitePatterns Protein kinases ATP-binding region signature. 186 207 IPR017441 GO:0005524
Gso14g0870 456 Coils Coil 64 91 - -
Gso14g0870 456 PANTHER OS09G0443600 PROTEIN 36 453 - -
Gso14g0870 456 Gene3D Transferase(Phosphotransferase) domain 1 283 455 - -
Gso14g0870 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Gso14g0870 456 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0870 Gso-Chr14 9998432 10005172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0870 173 453 MAP Kinase Kinase Kinase AT4G35780 36.396 4.29e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Gso14g0870 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0870 - - gmx:102666416 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0870 14 9998432 10005172 Gso14g0870 14 9998432 10005172 ECH