Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0853 ATGGGTGCATCTGGAAAATGGGTAAAAGCATTAATCGGACTCAACAACAAGAACGACCTCGGTGGGAAGAAGAAGAAGTGGAGGCTGTGGAAGATTTCTTCTGCAGGGGAAAACAGATCTCAAGACTACGACTACGCTAGCGTGGCTTCGGATTCTTTCAATGCTGCGGTGGCCACTGTGGTCAGAGCTCCGCCCAAGGATTTCAAACTACTCAAGCAAGAATGGGCCGCCACCCGAATCCAAACCGCTTTCCGCGCCTTCTTGGCAAGAAGGGCACTGAGGGCATTGAAGGGAGTGGTGAGACTTCAAGCTCTTGTACGAGGTAGACTCGTGAGGAAGCAGGCTGCGGTCACATTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCTCGTGTAAGAGCTCGGCGCGTGCGAATGTCTATTGAGGGCCAAGCAGTGCAGAACATGCTCAATGAACGCCGCACCAAGGCTGAACTCATCAAACAAGCTGAGGAAGGCTGGTGTGATAGCAAAGGATCATTGGAAGATGTCAAGACAAAATTACAGATGAGGCAAGAAGGAGCTTTCAAGAGGGAGAGAGCAATTGCATACTCTCTTGCCCACAAGCAATGGAGATCAACCCCCATCTCTAATTCAAGAGCAAATGCCACTCTCAACAATCAGGATACGGACAAGGCAAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAGCCATGGGAGAGTAGATTAATGGAACAAACCCATCATGCTAATGCCACAGAGAAGACCCCTCCTCCTCCGCCAAAGAAATGTGTTGACTCCTCAAATTCAAAAACATCAGAACCATGCAATGTCAAAATCAGAAAGAACAATGTCAGCACAAGGATCTCTGCTAGACCTCCCCTTATTTGGCAAGCTAATCATTTGTCCTCAAGTCCAAGTTCCGAGTTTCACTATGATGAGAGCTCTAATTCATCCTCAATATGCACTTCTACAACGCCAATATCTGGGAGTGCTGCATTGCCCTGTGACAGGACAGAGGATACTAACAACACAAGGCCTAGTTACATGAACCTCACCGAGTCAACCAAGGCGAAGCAGAAAACCAACAACCATCAATACAATAGATCTCATAGGCAGCAGTCCATGGATGAGTTCCAGTTTCTCAAAAGAACAGCGGTTTTCTCTAATGGTGCTTCTGACCCTTCAACCAACTTCTGTAGGCCTCTTTACCTACCAACCTACATGGATAAGAGGTCACAGTGA 1254 0.4817 MGASGKWVKALIGLNNKNDLGGKKKKWRLWKISSAGENRSQDYDYASVASDSFNAAVATVVRAPPKDFKLLKQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKAELIKQAEEGWCDSKGSLEDVKTKLQMRQEGAFKRERAIAYSLAHKQWRSTPISNSRANATLNNQDTDKANWGWSWLERWMAAKPWESRLMEQTHHANATEKTPPPPPKKCVDSSNSKTSEPCNVKIRKNNVSTRISARPPLIWQANHLSSSPSSEFHYDESSNSSSICTSTTPISGSAALPCDRTEDTNNTRPSYMNLTESTKAKQKTNNHQYNRSHRQQSMDEFQFLKRTAVFSNGASDPSTNFCRPLYLPTYMDKRSQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0853 417 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Gso14g0853 417 PANTHER IQ-DOMAIN 5-RELATED 1 416 - -
Gso14g0853 417 Pfam IQ calmodulin-binding motif 97 114 IPR000048 GO:0005515
Gso14g0853 417 Pfam IQ calmodulin-binding motif 75 94 IPR000048 GO:0005515
Gso14g0853 417 SMART iq_5 72 94 IPR000048 GO:0005515
Gso14g0853 417 SMART iq_5 95 116 IPR000048 GO:0005515
Gso14g0853 417 MobiDBLite consensus disorder prediction 336 373 - -
Gso14g0853 417 MobiDBLite consensus disorder prediction 250 278 - -
Gso14g0853 417 ProSiteProfiles IQ motif profile. 97 124 IPR000048 GO:0005515
Gso14g0853 417 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0853 Gso-Chr14 9497857 9501043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0853 1 414 IQD Protein Family AT2G26180 58.161 1.06e-138 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0853 - - gmx:100787102 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0853 14 9497857 9501043 Gso14g0853 14 9497857 9501043 ECH
Gso14g0853 14 9497857 9501043 Gso17g1928 17 38379214 38382403 GST
Gso14g0853 14 9497857 9501043 Gso4g0448 4 4232832 4235288 PCT
Gso14g0853 14 9497857 9501043 Gso6g0429 6 3975205 3977761 PCT
Gso4g0448 4 4232832 4235288 Gso14g0853 14 9497857 9501043 PCT
Gso6g0429 6 3975205 3977761 Gso14g0853 14 9497857 9501043 PCT