Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0851 ATGTACATGGAGAGAATTAGAGTGAAGGAGGAAGAAGCAGTGACATGTGGTGGTGGTTCATCATCATCATCATCTTCGTCTTCAAGCTTTTCTCCACAGCCTATGGAAGGGTTGCACGAGGTGGGTCCCCCTCCGTTTCTGAGCAAGATCTTTGACATGGTAGAAGATTCTTCCACGGACTCCATTGTGTCATGGAGCATGGCTCGCAACAGCTTTGTGGTGTGGGATTCTCACAAGTTTTCTGCTGACATTCTGCCTCGTTACTTCAAGCACGGCAATTTCTCCAGCTTCATTCGCCAGCTCAACGCCTATGGGTTTAGGAAAGTTGATCCTGATAGATGGGAATTTGCAAACGAAGGTTTTTTGGCAGGACAAAGGCACTTATTGAAGACCATTAAGAGAAGAAGAAATGTGTCACAGAGTTTGCAACAAAAAGGAGGAAGTGGAGCTTGTGTTGAAGTGGGGGAGTTTGGACTCGAAGGTGAGTTGGAGAGGTTGAAAAGAGACAGGAACATTTTGATGGCAGAAATTGTGAGATTGAGGCACCAACAACTGAACTCAAGGGAACAATTGAATTCCATGGAGACCAGATTGCAAGCCACTGAGAAGAAACAGCAGCAAATGATGAGTTTCCTTGCAAAAGCACTGAGTAACCCATCTTTCACGAAACAATTAGTCCAAAAGACCCCCCAAAGCAGAGAAGTGTTGGGTGTTGAAATCAATAGGAAAAGGAGACTGACTGCTAGTCCAAGTGTTGAGAACTTGCAACAAGATGATCAAGATTTGGCAACTTTGGATTATCCAAGCCATGATCGAGATTTGGCAACTATGGAGACTGATATGGACACTTTTTTCTCACCGGCTTATGATAATGAACTTAGCAGTGAAACCAATGAGCCTGCATCAATTTCGGTTGAGGATACAATCTTGGAGGACTTTCTCAACAAAGACTTGGTTACTTGGAATCCGGAGGATGAAGTTATAATTGGGGATAGTTCCCAAGTCGATGTGCCGGTGGAGGATTTGGTTGCAAACCCTGATGATTGGAGTGAGCAATTGCAGGACCTTGTGGATCATATGGACTATCTAGGCTAA 1095 0.4438 MYMERIRVKEEEAVTCGGGSSSSSSSSSSFSPQPMEGLHEVGPPPFLSKIFDMVEDSSTDSIVSWSMARNSFVVWDSHKFSADILPRYFKHGNFSSFIRQLNAYGFRKVDPDRWEFANEGFLAGQRHLLKTIKRRRNVSQSLQQKGGSGACVEVGEFGLEGELERLKRDRNILMAEIVRLRHQQLNSREQLNSMETRLQATEKKQQQMMSFLAKALSNPSFTKQLVQKTPQSREVLGVEINRKRRLTASPSVENLQQDDQDLATLDYPSHDRDLATMETDMDTFFSPAYDNELSSETNEPASISVEDTILEDFLNKDLVTWNPEDEVIIGDSSQVDVPVEDLVANPDDWSEQLQDLVDHMDYLG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0851 364 Pfam HSF-type DNA-binding 46 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso14g0851 364 MobiDBLite consensus disorder prediction 13 37 - -
Gso14g0851 364 PRINTS Heat shock factor (HSF) domain signature 46 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso14g0851 364 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso14g0851 364 PRINTS Heat shock factor (HSF) domain signature 97 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso14g0851 364 Gene3D - 39 136 IPR036388 -
Gso14g0851 364 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 20 284 - -
Gso14g0851 364 ProSitePatterns HSF-type DNA-binding domain signature. 85 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso14g0851 364 MobiDBLite consensus disorder prediction 16 34 - -
Gso14g0851 364 SMART hsfneu3 42 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso14g0851 364 SUPERFAMILY "Winged helix" DNA-binding domain 42 135 IPR036390 -
Gso14g0851 364 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 284 IPR027725 -
Gso14g0851 364 Coils Coil 163 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0851 Gso-Chr14 9476199 9479906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0851 32 364 HSF AT2G26150 52.522 8.08e-125 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gso14g0851 HSF_DNA-bind 2.8e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0851 K09419 - gmx:100778558 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0851 14 9476199 9479906 Gso14g0851 14 9476199 9479906 ECH
Gso14g0851 14 9476199 9479906 Gso17g1930 17 38407692 38411282 GST
Gso14g0851 14 9476199 9479906 Gso4g0446 4 4212716 4214814 PCT
Gso4g0446 4 4212716 4214814 Gso14g0851 14 9476199 9479906 PCT