Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0837 ATGACTCCTTATTCTCTGAACCCACCAGGCCCTTCCATACAAGCTGGTCAAAACCAACTCTTCAATATTTCTCCTAATAATCAGGACTGCCGTACCTTTTTTAACATATTTGATCCAAGGCAAACCAGCATAGAAATTGGAGGGTTAAGAGAAAATTATCGACAGGATGACAAGATGATATTGCATGATGGATCATCAAGCAACTGCAACTCGTCCTTCAATATTTCACCTGAGACAGTAGTTATGGTTGATCCATTAAGCAGCGCATGTGATCGGCGTAATTTACCATCTGAGGAAGAGAGCAAAAATAACGATCACGGGTCTGGGAACAAATGGATGTCTTCAAAGATGAGGTTAATGAAAAAAATGATGAGACCGAGTATCAGTCCAACCACTGACAAAGCAATCAATTCAAGCCCAAGATTCCAAAATCATCAAGGGCTCGAAAGCAGAAGGTACAGCCAAAGAAGCCCTCGTAACAACAACGGCAGTAGCACCCCTAGGGTTTGTTCGGATTGCAATACAAGCACTACCCCACTTTGGAGGACTGGCCCTAAGGGTCCCAAGTCTCTTTGCAATGCCTGTGGCATTAGACAGAGGAAGGCAAGAAGGGCAATGGCGGAAGCTGCAAATGGTTTGGTCACTCCCATAGCATGTGAAAAGACCAGACTACACAACAAGGAAAAGAAGTCTCGTATGAACCATTTTGCACAGTTCAAGAACAAGTACAAGTCCACTACTACTACTACTACTACTACTGTAGGCTCATCTGAGGGAGTGAGGAAGCTTGAATATTTCAACAACTTCGCCATAAGTTTGAGGAGTAACAACTCTGATTTTGAACAAATGTTTCCACGGGATGAAGTAGCTGAGGCGGCATTGCTTCTGATGGACTTATCTTGTGGTTTTGTCCACTTATAA 921 0.4321 MTPYSLNPPGPSIQAGQNQLFNISPNNQDCRTFFNIFDPRQTSIEIGGLRENYRQDDKMILHDGSSSNCNSSFNISPETVVMVDPLSSACDRRNLPSEEESKNNDHGSGNKWMSSKMRLMKKMMRPSISPTTDKAINSSPRFQNHQGLESRRYSQRSPRNNNGSSTPRVCSDCNTSTTPLWRTGPKGPKSLCNACGIRQRKARRAMAEAANGLVTPIACEKTRLHNKEKKSRMNHFAQFKNKYKSTTTTTTTTVGSSEGVRKLEYFNNFAISLRSNNSDFEQMFPRDEVAEAALLLMDLSCGFVHL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0837 306 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 27 305 - -
Gso14g0837 306 SMART GATA_3 164 215 IPR000679 GO:0006355|GO:0043565
Gso14g0837 306 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 27 305 - -
Gso14g0837 306 MobiDBLite consensus disorder prediction 130 183 - -
Gso14g0837 306 Gene3D - 160 234 IPR013088 GO:0006355|GO:0008270
Gso14g0837 306 ProSiteProfiles GATA-type zinc finger domain profile. 164 200 IPR000679 GO:0006355|GO:0043565
Gso14g0837 306 CDD ZnF_GATA 169 206 IPR000679 GO:0006355|GO:0043565
Gso14g0837 306 Pfam GATA zinc finger 170 203 IPR000679 GO:0006355|GO:0043565
Gso14g0837 306 MobiDBLite consensus disorder prediction 91 112 - -
Gso14g0837 306 MobiDBLite consensus disorder prediction 127 191 - -
Gso14g0837 306 ProSitePatterns GATA-type zinc finger domain. 170 195 IPR000679 GO:0006355|GO:0043565
Gso14g0837 306 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 165 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0837 Gso-Chr14 9179453 9182559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0837 111 305 C2C2-Gata Transcription Factor Family AT4G26150 38.426 1.06e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gso14g0837 GATA 1.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0837 - - gmx:100780326 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0837 14 9179453 9182559 Gso14g0837 14 9179453 9182559 ECH
Gso14g0837 14 9179453 9182559 Gso17g1938 17 38535372 38538596 GST
Gso14g0837 14 9179453 9182559 Gso4g0440 4 4157237 4158890 PCT
Gso4g0440 4 4157237 4158890 Gso14g0837 14 9179453 9182559 PCT