Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0828 ATGAGGATGGGAAGAAAATGTTCCTATTGTGGAAACTTTGGTCACAATTCAAGGACTTGCAACACTCACAAAAGGGGACTAAAGCTTTTTGGAGTGCAACTTGACCTTTGTTCTTCTTCTTCTTCATCATCATTGCCTTTAACATCTCCATGCACCTCTTCTTCTTCATCAACACCCTTTGATATCATGAAAAGAAGTTTGAGCATGGATTACCTTGTATCTTCACGAATCATCTCACCCTCTTATAATTTTCTGCTTGGTGGTGGTGCGGATGAAAATTCATCAGATAAAACAATAACTGATGGGTACATAGCCAGTGTCGGCGGTGGTGGACTCACTTCAACAACTCATCATCAAGAAAGGAAAAAAGGTGTGCCATGGAGTGAAGAGGAGCACCGGAAATTTCTTGAAGGACTGGAGAAGCTGGGGAAGGGTGATTGGAGAGGCATTTCTAAAAAATTTGTTATAACAAGAACACCATCTCAAGTGGCTAGTCATGCACAAAAATTTTTTTTGCGTCAAACTAGCTTCAATCAAAGAAAGCGCCGTCGTAGCCTCTTTGATATGGAAAGAGATGAAACCACTACACTTGAACAGTTTAATACTTGTTTCAAGGCAAGTGGTCAATTTGGGTCCCCATCAGGGACTATAATTACTTGTCCTCAGTGGGTTTCTTGCAATCATTCAGTGCTGAATTGGGCAACCACTTCAACAAACTACACTCATCAAAGTGCTTCCCCAGACCTAGAACTCAAACTAGCTGTTCCCATTCTAACAGAGCCATGCGGCAGAACAGAATTATAA 804 0.4129 MRMGRKCSYCGNFGHNSRTCNTHKRGLKLFGVQLDLCSSSSSSSLPLTSPCTSSSSSTPFDIMKRSLSMDYLVSSRIISPSYNFLLGGGADENSSDKTITDGYIASVGGGGLTSTTHHQERKKGVPWSEEEHRKFLEGLEKLGKGDWRGISKKFVITRTPSQVASHAQKFFLRQTSFNQRKRRRSLFDMERDETTTLEQFNTCFKASGQFGSPSGTIITCPQWVSCNHSVLNWATTSTNYTHQSASPDLELKLAVPILTEPCGRTEL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0828 267 Pfam Myb-like DNA-binding domain 126 169 IPR001005 -
Gso14g0828 267 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 202 - -
Gso14g0828 267 CDD SANT 126 171 IPR001005 -
Gso14g0828 267 Gene3D - 125 177 - -
Gso14g0828 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 175 IPR017930 -
Gso14g0828 267 ProSiteProfiles SANT domain profile. 127 175 IPR017884 -
Gso14g0828 267 PANTHER TRANSCRIPTION FACTOR KUA1 3 202 - -
Gso14g0828 267 SUPERFAMILY Homeodomain-like 120 176 IPR009057 -
Gso14g0828 267 MobiDBLite consensus disorder prediction 110 129 - -
Gso14g0828 267 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Gso14g0828 267 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Gso14g0828 267 SMART sant 123 173 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0828 Gso-Chr14 9101253 9103309 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso14g0828 Myb_DNA-binding 9.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0828 - - gmx:100779256 514.998