Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0807 ATGAGTTTTCATGATACATCAAACACGGGGCTTGGACTTGGTCTTGGTCTTGGACTTGTTAGCTTCCATGATCAATCAGAGAATTGCATGAAGAGTACTAATGATCCCTTGAGAGAAATCCATAAGATAAAAAAGGTGGAGAATCCATCAAAATGTAACAGCACATACCCTTCACTTACATTAGGACCACCAGATGATGATGATGATGATGATGATGAAGTGAATAATCAACCACCAAGTTCAAAAACTGAGTCCTATGAATATTTTCGTCCCCATGTTTCTTCTCCTAGTGCGGTGTCTTCATTTTCCAACTATTCTAGCATCAAGAGGGAAAGAGATCAGGTTTTGTGGGAAAAAGAATTTGAGGTAGAGGTAGAGAAAGTTCCAACAAGGGTTGGTGATGTTGACGAAGATGGTAACCCCAGAAAGAAACTTAGGCTCACAAAAGAGCAAGCCGCAGTCTTGGAGGAAAATTTCAGAGAGCATTCTACTCTTAATCCGAAGCAAAAGCAAGAATTGGCAATGAAGCTGAATCTGCGAGCAAGACAAGTAGAGGTGTGGTTTCAGAATAGGAGAGCCAGGACAAAGCTAAAGCAAACCGAGTCAGATTGTGAACTATTGAAGAAATGTTGCGATACTCTAACCGAAGAAAATAAGAAGCTGCAAAAGGAGCTGCAAGAACTAAAGTCAATACAAGCAACGCCAATGCCCCTTTATATGCAGATTCCAGCAGCCACACTTTGCATTTGCCCTTCTTGTGAGAGAATATGTGGTGGCAACAACAACAGTGATGGCGGCAACAATAATAATGGCTCTTCACACACGACATCGTTGCTCATTGGCTCAAAGACACATCATCATTCCTTTTACAAAAGTAACAAGTATCCATTCCCCCACTCATCATCCGCAGCATGCTAG 918 0.4161 MSFHDTSNTGLGLGLGLGLVSFHDQSENCMKSTNDPLREIHKIKKVENPSKCNSTYPSLTLGPPDDDDDDDDEVNNQPPSSKTESYEYFRPHVSSPSAVSSFSNYSSIKRERDQVLWEKEFEVEVEKVPTRVGDVDEDGNPRKKLRLTKEQAAVLEENFREHSTLNPKQKQELAMKLNLRARQVEVWFQNRRARTKLKQTESDCELLKKCCDTLTEENKKLQKELQELKSIQATPMPLYMQIPAATLCICPSCERICGGNNNSDGGNNNNGSSHTTSLLIGSKTHHHSFYKSNKYPFPHSSSAAC* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0807 305 Coils Coil 197 234 - -
Gso14g0807 305 Gene3D - 134 204 - -
Gso14g0807 305 ProSitePatterns 'Homeobox' domain signature. 173 196 IPR017970 GO:0000981|GO:0006355
Gso14g0807 305 ProSiteProfiles 'Homeobox' domain profile. 138 198 IPR001356 GO:0003677
Gso14g0807 305 SUPERFAMILY Homeodomain-like 139 206 IPR009057 -
Gso14g0807 305 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 1 303 - -
Gso14g0807 305 Pfam Homeodomain 142 196 IPR001356 GO:0003677
Gso14g0807 305 MobiDBLite consensus disorder prediction 48 85 - -
Gso14g0807 305 CDD homeodomain 141 199 IPR001356 GO:0003677
Gso14g0807 305 Pfam Homeobox associated leucine zipper 198 230 IPR003106 GO:0006355|GO:0043565
Gso14g0807 305 SMART halz 198 241 IPR003106 GO:0006355|GO:0043565
Gso14g0807 305 PANTHER - 1 303 - -
Gso14g0807 305 SMART HOX_1 140 202 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0807 Gso-Chr14 8727161 8729840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0807 1 305 Homeobox Transcription Factor Family AT2G22800 45.455 1.21e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gso14g0807 Homeodomain 3.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0807 K09338 - gmx:100807072 536.569