LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso14g0786	ATGGATCTTGGGGTAGTGGGTTTGGAGGGGGTGGTGGGTTCAGAAAGTGGTTGCGTGTTTGGTTCCTCTCTTGCTTCAGATCCTGAGACAAAGCACAAGTGGTACGGATCTGGTGTGCTCAAGCAAGAGAGATCTGCCATAGCAAGTGAAGATGATGAGTGGGGAACTTATAAAGTGGCCAAAATTGATCATGACATGTCTTCTGCCCCTAAAGCAATGATCTTTCAGCAAAGAAACAACTCTTTGTTGAGATCTAATAATGCTACTCTTTTTTCTGACGGCCATCACCAATCTCAAATGTTGAGTTTCTCTTCTCCAAAGTCAGAGACTTTGTTGGTAGATACAGCTTCCTCAAATGCCACATTGCCTTTTTCTTACCATCAATTGTCTAGTTACAGCAGAAATACAGGTTACAGTTCAGGAAGCATAAGCATGCATGGGGCTTTGGCTGGTGTGAGAGGGCCATTCACTCCATCACAGTGGATGGAGCTTGAACACCAAGCCTTGATCTACAAATACATCACTGCAAACATGCCTGTGCCAACTCATCTTCTCATACCCATCAGAAAAGCACTTGATTCTGTTGGCTTCTGCAACTTCTCAACTGGACTCCTCAGATCCAACTCATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAGCACGGACCCTGAGCCAGGGAGGTGCAGGAGAACAGATGGAAAGAAATGGCGATGCTCAAGAGATGCCGTAGTAGATCAGAAGTATTGTGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACCACCACCACTACTAACACACTTAATGCTTCCTCAAACTCAACCGTGGTGCCCGGCAACAACACCTTTGCACACAACAAAGTGCACCACCCTCTTCCACCTAATTCCTCTCCAGCCAATACCATCAATAGGATGTTTATGAATAATAAAGAGAATAACAGCACGAGTGAGAGGATGGAGGATTGCTCTGCCCTTCCCATGCTACCTCCCACTCTTGAGCTGAAACCGAAGGAGAAAAACAATTTCATGATTCATAAACACCAAGACCCCTATGATGAATCCTCAAGGAACAACAATGAGTTTGGACTCGTCACTTCTGATTCCTTGCTTAACCCTACACAGAAAAGAAGCTTTGATTCTTCTTCTTCACAAAAGGATGATTCTGAGTCCCAACAACAACATTCCCTCAGGCACTTCATTGATGACTCTCCCAAACCACCATCTCATAATCATCATCGTTCGTCGTCCATTTGGCCCGAACTCGACAACATACAGTCAGATAGGACTCAGTTATCAATCTCCATACCAATATCTTCCTCAGACTTCATGTCATTCACTACTTCCTCACCCTCCAACGAGAAACTCACGTTGTCGCCACTTAGGCTTTCGAGGGCGTTAGACCCCATTCAAATGGGGTTGGGAGTGGGAAGCGGTGCCTCCAATGAAGCAAATCCTAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGCCCTCTTGGAGAGGTTTTGAACCTTAGCAATAACAGCAATGCAAGTGATCAATGTGGCAAGAACAACACTTCAGCTCTCAACCTCATGAAAGATGATGATGATGATGGGTGGGACAATAGTCCTCCACTAGGGTCATCACCAACTGGGGTGTTGCAAAAAACAGCATTTGGATCACTCTCCAACAGCAGTGCTGGGAGCAGTCCAAGGGGGGCACCAGAGAACAACAAAGAATAG	1785	0.4644	MDLGVVGLEGVVGSESGCVFGSSLASDPETKHKWYGSGVLKQERSAIASEDDEWGTYKVAKIDHDMSSAPKAMIFQQRNNSLLRSNNATLFSDGHHQSQMLSFSSPKSETLLVDTASSNATLPFSYHQLSSYSRNTGYSSGSISMHGALAGVRGPFTPSQWMELEHQALIYKYITANMPVPTHLLIPIRKALDSVGFCNFSTGLLRSNSLGWGGFHLGFSNSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTTTTNTLNASSNSTVVPGNNTFAHNKVHHPLPPNSSPANTINRMFMNNKENNSTSERMEDCSALPMLPPTLELKPKEKNNFMIHKHQDPYDESSRNNNEFGLVTSDSLLNPTQKRSFDSSSSQKDDSESQQQHSLRHFIDDSPKPPSHNHHRSSSIWPELDNIQSDRTQLSISIPISSSDFMSFTTSSPSNEKLTLSPLRLSRALDPIQMGLGVGSGASNEANPRQANWIPITWESSMGGPLGEVLNLSNNSNASDQCGKNNTSALNLMKDDDDDGWDNSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRGAPENNKE*	595

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso14g0786	594	MobiDBLite	consensus disorder prediction	371	405	-	-
Gso14g0786	594	Pfam	QLQ	155	189	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
Gso14g0786	594	ProSiteProfiles	QLQ domain profile.	155	190	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
Gso14g0786	594	SMART	QLQ_2	154	190	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
Gso14g0786	594	MobiDBLite	consensus disorder prediction	529	594	-	-
Gso14g0786	594	MobiDBLite	consensus disorder prediction	406	425	-	-
Gso14g0786	594	MobiDBLite	consensus disorder prediction	257	319	-	-
Gso14g0786	594	ProSiteProfiles	WRC domain profile.	224	268	IPR014977	-
Gso14g0786	594	MobiDBLite	consensus disorder prediction	529	543	-	-
Gso14g0786	594	Pfam	WRC	225	267	IPR014977	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso14g0786	Gso-Chr14	8365762	8369960	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso14g0786	41	574	GRF Transcription Factor Family	AT2G22840	41.499	4.09e-98	307

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRF	Gso14g0786		WRC	5.5e-21	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso14g0786	-		-	gmx:100807080	1148.27

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