Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0640 ATGTTTCATCGCTGGAGCAATTCTCATCAACAGGATCAGGGAAGCAGCGAGCTTTATGCTGAATCCAAGATTAAAGAGCTGAAGGGTGTTATCGGACCCTTATCTGGACGCAGTTTGACGTATTGCACTGATGCATGTTTTAAGAGATATTTGGAAGCTCGAAACTGGAACGTAGACAAGTCCAAGAAGATGTTGGAGGAGACACTCAGGTGGAGATCAACCTATAAGCCAGAGGAAATTCGCTGGCATGAGGTTGCAATGGAAGGAGAGACTGGGAAATTGTATAGAGCAAGTTTTCATGATAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTACTTCAATGGAGAATCAGTTGCGGCATCTTGTGTATCTTTTGGAAAATGCCATGCTTAATCTTCCACCGGGTCAAGAACAAATGTCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCCTTAAATTAGCCAGAGAGACCATCAACATTTTGCAGAATCACTACCCTGAGAGGCTTGCCATAGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGACAACAAGACATTTCAGAAGGTGAAGTTTGTCTACCCGAATAATAAAGATAGTGTGCAGGTCATGAAGTCCTATTTTGATGAGGAAAATCTGCCCAAAGAACTAGGTGGAAAAAGCATAATGAGTTATAACCATGAGGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAGTGTGCAGCATTTTGGGGATCTGATGGGAAGCTCTCAAACCACATTGTCAACGGGAATTCTGCATCAGTTCTAAAATGA 861 0.4216 MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASVLK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0640 286 SMART CRAL_TRIO_N_2 43 68 IPR011074 -
Gso14g0640 286 PANTHER CELLULAR RETINALDEHYDE BINDING/ALPHA-TOCOPHEROL TRANSPORT-RELATED 7 276 - -
Gso14g0640 286 SUPERFAMILY CRAL/TRIO domain 82 253 IPR036865 -
Gso14g0640 286 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 82 246 IPR001251 -
Gso14g0640 286 PANTHER GH16843P 7 276 - -
Gso14g0640 286 SUPERFAMILY CRAL/TRIO N-terminal domain 20 84 IPR036273 -
Gso14g0640 286 Pfam CRAL/TRIO domain 93 240 IPR001251 -
Gso14g0640 286 CDD SEC14 100 241 IPR001251 -
Gso14g0640 286 SMART sec14_4 88 243 IPR001251 -
Gso14g0640 286 Pfam CRAL/TRIO, N-terminal domain 43 67 IPR011074 -
Gso14g0640 286 Gene3D - 4 269 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0640 Gso-Chr14 6286696 6292776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0640 49 222 Acyl Lipid Metabolism Gene Families AT5G47730 26.316 1.68e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0640 - - gmx:100800854 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0640 14 6286696 6292776 Gso17g2114 17 40860817 40863120 GST