Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0603 ATGGACGTTGATCCTCGCCACTACGAACAAATTGCTATAAATGAAAACGATGTCAACAACATCATTCTGTCATACCTTATACATAATTGCTACAAAGAGTCGTCAGAGTCATTCATTTCTTGCACTGGGATGAAGCAGCCTGCAGATCATTTGGAGAACATGGAAAAAAGAAAAAGAATCTTTCACCATGCATTGGAGGGAAATGTACTTAAGGCTATTGAGCTCACGGGGCAGCTGGCACAGGATATTCTGGAGAACAATAACGATTTGCTGTTTGATCTTCTAAGCCTTCATTTTGTAGACCTTGTCTGCTCTAAGAAATGGACAGAAGCTTTAGAGTTTGCTCAGACCAAGTTGAGTCCTTTTAGTGTGAAGGAGCAGAAATATATGGACAAAATAGAAGGTTTTATGTCCCTTCTTGCTTATGAGAATCCAGTGGAATGCCCAATGTTTCATCTGATCGGCTTAGACTATCGGCAACAAGTTGTGGATAGTTTAAATCAAACTATTCTCGCACACTTTAACCTTCCCATCCACACTGCCATGGAGCGGCTTATACAACAGACCTCAGTAGTTAGACAATGCTTAAGCCAGGAGGATGGGGGGCCTCCACCATTTTCCTTGAAGGATTTTCTTAAAAGTCGATGA 648 0.4136 MDVDPRHYEQIAINENDVNNIILSYLIHNCYKESSESFISCTGMKQPADHLENMEKRKRIFHHALEGNVLKAIELTGQLAQDILENNNDLLFDLLSLHFVDLVCSKKWTEALEFAQTKLSPFSVKEQKYMDKIEGFMSLLAYENPVECPMFHLIGLDYRQQVVDSLNQTILAHFNLPIHTAMERLIQQTSVVRQCLSQEDGGPPPFSLKDFLKSR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0603 215 SMART toby_final6 106 202 IPR013144 -
Gso14g0603 215 SMART ctlh 53 110 IPR006595 -
Gso14g0603 215 Pfam CTLH/CRA C-terminal to LisH motif domain 54 193 IPR024964 -
Gso14g0603 215 PANTHER RAN BINDING PROTEIN 9-RELATED 7 213 - -
Gso14g0603 215 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Gso14g0603 215 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 7 213 - -
Gso14g0603 215 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0603 Gso-Chr14 5899321 5902723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0603 K23338 - gmx:100813665 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0603 14 5899321 5902723 Gso17g2152 17 41181003 41183893 GST
Gso14g0603 14 5899321 5902723 Gso4g0248 4 2298195 2301457 PCT
Gso14g0603 14 5899321 5902723 Gso6g0229 6 2209405 2212655 PCT
Gso4g0248 4 2298195 2301457 Gso14g0603 14 5899321 5902723 PCT
Gso6g0229 6 2209405 2212655 Gso14g0603 14 5899321 5902723 PCT