Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0601 ATGGTGTCTCTAACTTCATCTTTCAACATTCAATTGCTGCACGAGACTCGCTTCTTCTCCCCTTTCTTCCTCCCACCAAGGCATAGGAGCGTCCAATTCCACCACACACGACGCAACTTCGTTAACTACAAACGGAAAACGGCACGGTGCGGCGTCACCAGCGCCGACGCGTCTACTCCGCTGTCAACGTCGTTGGCGAAGGAACCTCACAAATACTTCGACCACGTCATCATCACCGTTCGTTCCGGCGACGGAGGCCACGGCGCGGTGCTGAATCAGCAGCAGCAGGAGCAGGAGCAGCAAGGAAAAACGAAGTTGAAGAAAGGGAAAGGCTCCTTGAAGAGGGATTTCGACGGGTCCCTCATTCTCCCCATGGGTGGCCACGGTGGTGACGTGTTGCTCTACGCTGACGAGTCCAAAGACACGTTGCTCGAGTTTCACAACAAAAGCCGCTACCACGCTAAGCGCGGTGGCAACGTTGACGCCATGGGCGTTTTGACTTCGATGCTTCGCGATGGACTTGCTGCACCGACTCTGCGCATTCCTGTTCCTGTAGGTACAGTTGTGAAAAGCAAACGAGGGAAGATGTTGGCTGATCTAGCACAACCTTGGGATGAAGTTCTTGTTGCGAGGGGAGGACAAGGAGGGATTAGCTTGTTAGAAATTCCACAGCATAAAAGGAAAAAGATGATGGCTCTTACAACTAATGTGATGAGAGATGAATCAGACAAGGTTTTAATTCACGGTCAACCTGGGGAGGAAGTTAAGTTGGAGTTGATCCTACGAGTTGTTGCTGACATTGGTCTGATTGGACTTCCAAATGCTGGGAAATCAACACTTCTGGCAGCCATTACACTTGCAAAACCCGACATTGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGGCTTGGTGGTGATCCCAGCTTGGGGGCAGGAATGTATTCATCTGAAGCTACATTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGCAATTTTTTGAGGCACCTCAGGAGGACCCGGCTATTGGTCCATGTTGTGGATGCTGCCACTGAGAATCCTATAAATGACTACAGAACTGTCAGAGAAGAGTTACGCATGTATAATCCTGAGTACCTTGAACGACCATACGTTATAATTTTGAATAAGATTGACCTACCAGAGGCAAAGGACAAACTTCAATCATTGACTCAAGAAATTATGAGAATTGGCAACAATGGTGCTGCTTCCGAACCAAAACCATGCTCTGAAGTTCTAGATCCATTGTCTGATGAAACTGACAGGAAGGAAAAAAGACTTGAGGACTATCCACGACCTCTCTCTGTTGTTGGAGTTAGTGTTCTAAAGGGTATCAGAATTAATGAGATGTTAAAGGAGATAAGGTCGGCTTTAAGGAAGTGCTCAGATTCCAAAGAAGCATTGGCTTTCGGTGTGCCACCTTGA 1473 0.4779 MVSLTSSFNIQLLHETRFFSPFFLPPRHRSVQFHHTRRNFVNYKRKTARCGVTSADASTPLSTSLAKEPHKYFDHVIITVRSGDGGHGAVLNQQQQEQEQQGKTKLKKGKGSLKRDFDGSLILPMGGHGGDVLLYADESKDTLLEFHNKSRYHAKRGGNVDAMGVLTSMLRDGLAAPTLRIPVPVGTVVKSKRGKMLADLAQPWDEVLVARGGQGGISLLEIPQHKRKKMMALTTNVMRDESDKVLIHGQPGEEVKLELILRVVADIGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMYNPEYLERPYVIILNKIDLPEAKDKLQSLTQEIMRIGNNGAASEPKPCSEVLDPLSDETDRKEKRLEDYPRPLSVVGVSVLKGIRINEMLKEIRSALRKCSDSKEALAFGVPP* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0601 490 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 48 484 IPR045086 GO:0003924|GO:0005525
Gso14g0601 490 MobiDBLite consensus disorder prediction 428 443 - -
Gso14g0601 490 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 265 475 IPR031167 GO:0005525
Gso14g0601 490 Pfam 50S ribosome-binding GTPase 266 393 IPR006073 GO:0005525
Gso14g0601 490 ProSiteProfiles Obg domain profile. 70 264 IPR006169 -
Gso14g0601 490 MobiDBLite consensus disorder prediction 417 443 - -
Gso14g0601 490 CDD Obg 265 410 IPR031167 GO:0005525
Gso14g0601 490 Gene3D - 264 483 IPR027417 -
Gso14g0601 490 Pfam GTP1/OBG 74 262 IPR006169 -
Gso14g0601 490 ProSitePatterns GTP1/OBG family signature. 325 338 IPR006074 GO:0005525
Gso14g0601 490 Gene3D GTP1/OBG domain 71 263 IPR036726 -
Gso14g0601 490 PRINTS GTP1/OBG GTP-binding protein family signature 267 287 IPR006073 GO:0005525
Gso14g0601 490 PRINTS GTP1/OBG GTP-binding protein family signature 288 306 IPR006073 GO:0005525
Gso14g0601 490 PRINTS GTP1/OBG GTP-binding protein family signature 323 338 IPR006073 GO:0005525
Gso14g0601 490 PRINTS GTP1/OBG GTP-binding protein family signature 340 358 IPR006073 GO:0005525
Gso14g0601 490 SUPERFAMILY Obg GTP-binding protein N-terminal domain 72 231 IPR036726 -
Gso14g0601 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 475 IPR027417 -
Gso14g0601 490 Coils Coil 396 416 - -
Gso14g0601 490 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 48 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0601 Gso-Chr14 5880707 5885178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0601 - - gmx:100804045 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0601 14 5880707 5885178 Gso17g2154 17 41194222 41199080 GST