Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0596 ATGGACGGTTTTCCACCGGAGGCGGAGGCAACGGCGGTGGCCGTACGGCGGGCGTTGGAGCTTCTGCAGCTGAACGACCCCGTTTTGAGGGTCCAAGCGGCGAGGGACATCCGGCGCCTCACCAAGACCTCGCAGCGGTGCCGCCGCCAGCTCCGGCAAGCCGTGGCGCCACTCGTGTCCATGCTCCGAGTCGACTCGCCCGAGTTCCACGAACCTGCGCTTCTCGCTCTGCTTAACCTCGCCGTACAAGACGAAACGAATAAAATTAGCATTGTGGAAGCTGGTGCATTAGAGCCAATAATTAGTTTCCTCAAGTCACAAAATCCAAATATGCAGGAGTATGCAACTGCATCTTTGCTCACTCTATCTGCCTCTCCAACCAACAAGCCAATCATTAGTGCTTGTGGCACCATTCCTCTTCTTGTGAATATTCTAAGAGATGGAAGCCCTCAAGCTAAAGTTGATGCTGTGACGGCTCTGTCCAATTTATCAACAACACAACCTGAAAACCTCAGCATCATTCTCCAAACAAATGCAATGCCTTTAATTGTTAGCCTTCTCAAAACCTGTAGAAAATCCTCAAAAATAGCTGAAAAATGTTCTGCTTTGATAGAATCCTTGGTAGGTTATGAGGAGGGGAGAACTTCCTTAACATCTGAAGAAGGTGGAGTTCTTGCAGTTGTGGAAGTTCTTGAAAATGGTACTCCCCAAAGTAGGGAACATGCTGTTGGAGCACTGCTGACAATGTGCCAAAGTGATAGATGTAAATATAGGGAACCAATTCTTAGAGAAGGTGTTATTCCGGGACTTCTTGAGCTTACAGTTCAAGGAACCCCCAAGTCTCAGCCAAAGGCACGTACCCTTTTGCAGTTACTAAGAGAGTCTCCATATTCAAGACCTGAAGCTGAACCTGACACTCTTGAGAACATAGTGTGTGACATCATATCACAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTAGCTGAGATGGTCCAAGTCAGCATGGAGCAGAGTTTGAGACATTTACAGCAAAGGGCTCTTGTATGTACCCCTAGTGAAATGCCTATTGCAAGTTGTGCTTCTGAAGTTTCTTCAAAATATTAG 1116 0.4722 MDGFPPEAEATAVAVRRALELLQLNDPVLRVQAARDIRRLTKTSQRCRRQLRQAVAPLVSMLRVDSPEFHEPALLALLNLAVQDETNKISIVEAGALEPIISFLKSQNPNMQEYATASLLTLSASPTNKPIISACGTIPLLVNILRDGSPQAKVDAVTALSNLSTTQPENLSIILQTNAMPLIVSLLKTCRKSSKIAEKCSALIESLVGYEEGRTSLTSEEGGVLAVVEVLENGTPQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQPKARTLLQLLRESPYSRPEAEPDTLENIVCDIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSEMPIASCASEVSSKY* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0596 371 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 178 222 IPR000225 GO:0005515
Gso14g0596 371 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 136 178 IPR000225 GO:0005515
Gso14g0596 371 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 53 95 IPR000225 GO:0005515
Gso14g0596 371 Pfam Armadillo/beta-catenin-like repeat 87 123 IPR000225 GO:0005515
Gso14g0596 371 Pfam Armadillo/beta-catenin-like repeat 128 164 IPR000225 GO:0005515
Gso14g0596 371 PANTHER U BOX DOMAIN-CONTAINING 8 353 - -
Gso14g0596 371 SMART arm_5 210 251 IPR000225 GO:0005515
Gso14g0596 371 SMART arm_5 44 82 IPR000225 GO:0005515
Gso14g0596 371 SMART arm_5 84 124 IPR000225 GO:0005515
Gso14g0596 371 SMART arm_5 167 209 IPR000225 GO:0005515
Gso14g0596 371 SMART arm_5 125 165 IPR000225 GO:0005515
Gso14g0596 371 SUPERFAMILY ARM repeat 15 304 IPR016024 -
Gso14g0596 371 Gene3D - 4 353 IPR011989 -
Gso14g0596 371 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0596 Gso-Chr14 5821907 5826199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0596 15 293 U-box Gene Family AT2G23140 33.808 1.62e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0596 - - gmx:100793971 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0596 14 5821907 5826199 Gso2g2101 2 45628192 45632320 GST
Gso18g0344 18 3239599 3243738 Gso14g0596 14 5821907 5826199 PCT
Gso13g1273 13 28017931 28022205 Gso14g0596 14 5821907 5826199 PCT
Gso14g0596 14 5821907 5826199 Gso18g0344 18 3239599 3243738 PCT
Gso14g0596 14 5821907 5826199 Gso13g1273 13 28017931 28022205 PCT